(19 nodes) Golgi transport complex network (Oryza glumipatula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9YFQ8	Uncharacterized protein. (1069 aa)
	A0A0D9YRV5	Cog4 domain-containing protein. (761 aa)
	A0A0D9Z475	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (686 aa)
	A0A0D9Z4B0	Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (643 aa)
	A0A0D9Z6Y5	PA domain-containing protein. (714 aa)
	A0A0D9ZFT7	Uncharacterized protein. (757 aa)
	A0A0D9ZYG7	Uncharacterized protein. (822 aa)
	A0A0E0A8P1	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (485 aa)
	A0A0E0AD17	Uncharacterized protein. (835 aa)
	A0A0E0AKP4	Uncharacterized protein. (226 aa)
	A0A0E0APB6	PA domain-containing protein. (626 aa)
	A0A0E0AW42	Uncharacterized protein. (765 aa)
	A0A0E0AYY5	DUF1992 domain-containing protein. (235 aa)
	A0A0E0B9C3	Uncharacterized protein. (631 aa)
	A0A0E0BDD4	RING-type domain-containing protein. (155 aa)
	A0A0E0BN06	Uncharacterized protein. (110 aa)
	A0A0E0BN11	Uncharacterized protein. (152 aa)
	A0A0E0BN13	PA domain-containing protein. (179 aa)
	A0A0E0BTN7	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (608 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9YFQ8	A0A0D9YRV5	Uncharacterized protein.	Cog4 domain-containing protein.	0.999
A0A0D9YFQ8	A0A0D9Z475	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.999
A0A0D9YFQ8	A0A0D9ZFT7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A0D9YFQ8	A0A0D9ZYG7	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0D9YFQ8	A0A0E0AD17	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A0D9YFQ8	A0A0E0AKP4	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0D9YFQ8	A0A0E0AW42	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A0D9YFQ8	A0A0E0BTN7	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	0.989
A0A0D9YRV5	A0A0D9YFQ8	Cog4 domain-containing protein.	Uncharacterized protein.	0.999
A0A0D9YRV5	A0A0D9Z475	Cog4 domain-containing protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.999
A0A0D9YRV5	A0A0D9ZFT7	Cog4 domain-containing protein.	Uncharacterized protein.	0.999
A0A0D9YRV5	A0A0D9ZYG7	Cog4 domain-containing protein.	Uncharacterized protein.	0.984
A0A0D9YRV5	A0A0E0AD17	Cog4 domain-containing protein.	Uncharacterized protein.	0.999
A0A0D9YRV5	A0A0E0AKP4	Cog4 domain-containing protein.	Uncharacterized protein.	0.984
A0A0D9YRV5	A0A0E0AW42	Cog4 domain-containing protein.	Uncharacterized protein.	0.999
A0A0D9YRV5	A0A0E0BTN7	Cog4 domain-containing protein.	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	0.985
A0A0D9Z475	A0A0D9YFQ8	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Uncharacterized protein.	0.999
A0A0D9Z475	A0A0D9YRV5	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Cog4 domain-containing protein.	0.999
A0A0D9Z475	A0A0D9ZFT7	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Uncharacterized protein.	0.999
A0A0D9Z475	A0A0D9ZYG7	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Uncharacterized protein.	0.991