(118 nodes) Transmembrane transporter complex network (Oryza glumipatula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9ZDS9	Uncharacterized protein. (222 aa)
	A0A0D9ZCP8	Uncharacterized protein. (76 aa)
	A0A0D9ZCF3	Uncharacterized protein. (184 aa)
	A0A0D9ZCF2	Uncharacterized protein. (604 aa)
	A0A0D9ZBY4	Chloride channel protein. (939 aa)
	A0A0D9ZB22	Cyclic nucleotide-binding domain-containing protein. (711 aa)
	A0A0D9Z8J6	Ion_trans_2 domain-containing protein. (93 aa)
	A0A0D9Z7F6	Uncharacterized protein. (78 aa)
	A0A0D9Z7F1	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (135 aa)
	A0A0D9Z6Y6	Protein kinase domain-containing protein. (971 aa)
	A0A0D9Z6U9	Uncharacterized protein; Belongs to the cytochrome P450 family. (561 aa)
	A0A0D9Z6C5	Uncharacterized protein. (173 aa)
	A0A0D9Z4E2	MCU domain-containing protein. (338 aa)
	A0A0D9Z3V2	Uncharacterized protein; Belongs to the peptidase M16 family. (646 aa)
	A0A0D9Z3A6	Uncharacterized protein. (212 aa)
	A0A0D9Z295	BTB domain-containing protein. (317 aa)
	A0A0D9Z0U3	Uncharacterized protein. (704 aa)
	A0A0D9Z049	Epimerase domain-containing protein. (408 aa)
	A0A0D9YZD8	Uncharacterized protein; Belongs to the CRISP family. (362 aa)
	A0A0D9YXI4	Chloride channel protein. (818 aa)
	A0A0D9YXF3	Uncharacterized protein. (150 aa)
	A0A0D9YWV2	Uncharacterized protein. (156 aa)
	A0A0D9YV34	Ammonium transporter. (496 aa)
	A0A0D9YV31	Ammonium transporter. (498 aa)
	A0A0D9YUW1	Uncharacterized protein. (472 aa)
	A0A0D9YTP9	Chloride channel protein; Belongs to the chloride channel (TC 2.A.49) family. (804 aa)
	A0A0D9Y3F9	Uncharacterized protein. (118 aa)
	A0A0D9Y6N1	Uncharacterized protein. (1047 aa)
	A0A0D9Y6W1	Uncharacterized protein. (330 aa)
	A0A0D9Y9Q8	Uncharacterized protein. (128 aa)
	A0A0D9YTG9	Ammonium transporter. (480 aa)
	A0A0D9YSP6	Uncharacterized protein. (258 aa)
	A0A0D9YNR1	Uncharacterized protein. (978 aa)
	A0A0D9YK73	Protein kinase domain-containing protein. (1015 aa)
	A0A0D9YIW8	Uncharacterized protein. (61 aa)
	A0A0D9YI50	Chloride channel protein; Belongs to the chloride channel (TC 2.A.49) family. (793 aa)
	A0A0D9YGV1	Uncharacterized protein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (622 aa)
	A0A0D9YGU7	Ammonium_transp domain-containing protein. (107 aa)
	A0A0D9YGU6	Ammonium transporter. (497 aa)
	A0A0D9YGM6	Protein kinase domain-containing protein. (1373 aa)
	A0A0D9YGG8	MCU domain-containing protein. (305 aa)
	A0A0D9YFU7	Cyclic nucleotide-binding domain-containing protein. (673 aa)
	A0A0D9YF58	Uncharacterized protein. (226 aa)
	A0A0D9YF04	Uncharacterized protein. (122 aa)
	A0A0D9YDU9	Uncharacterized protein. (662 aa)
	A0A0D9YDS7	Chloride channel protein. (708 aa)
	A0A0D9YD46	Uncharacterized protein. (592 aa)
	G8JBE5_9ORYZ	Prohibitin. (289 aa)
	A0A0E0BUW2	Phos_pyr_kin domain-containing protein. (354 aa)
	A0A0E0BSJ9	Cyclic nucleotide-binding domain-containing protein. (682 aa)
	A0A0E0BS36	Chloride channel protein. (757 aa)
	A0A0E0BPK4	Uncharacterized protein. (273 aa)
	A0A0E0BN87	Uncharacterized protein. (137 aa)
	A0A0E0BN52	Uncharacterized protein; Belongs to the cytochrome P450 family. (347 aa)
	A0A0E0BN36	Ion_trans_2 domain-containing protein. (99 aa)
	A0A0E0BMX5	MCU domain-containing protein. (133 aa)
	A0A0E0BIM3	Ammonium_transp domain-containing protein. (223 aa)
	A0A0E0BEQ4	MCU domain-containing protein. (98 aa)
	A0A0E0BEP9	Uncharacterized protein. (124 aa)
	A0A0E0BEN8	Uncharacterized protein. (182 aa)
	A0A0E0BEN7	Uncharacterized protein; Belongs to the cytochrome P450 family. (69 aa)
	A0A0E0BEN4	Uncharacterized protein. (867 aa)
	A0A0E0BDK8	Uncharacterized protein. (597 aa)
	A0A0E0BDI5	Uncharacterized protein. (142 aa)
	A0A0E0BCD3	MCU domain-containing protein. (183 aa)
	A0A0E0BAX1	BTB domain-containing protein. (363 aa)
	A0A0E0B6T7	Uncharacterized protein. (123 aa)
	A0A0E0B6K9	Uncharacterized protein. (151 aa)
	A0A0E0B5A2	Uncharacterized protein. (162 aa)
	A0A0E0B4M0	Uncharacterized protein. (117 aa)
	A0A0E0B4L6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (455 aa)
	A0A0E0AYX2	Uncharacterized protein. (124 aa)
	A0A0E0AXB9	Uncharacterized protein. (109 aa)
	A0A0E0AXB8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (423 aa)
	A0A0E0AX55	Chloride channel protein. (750 aa)
	A0A0E0ATN0	Chloride channel protein. (808 aa)
	A0A0E0AQZ5	Uncharacterized protein. (642 aa)
	A0A0E0APC9	Uncharacterized protein. (394 aa)
	A0A0E0APB7	Uncharacterized protein. (61 aa)
	A0A0E0ANH6	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (504 aa)
	A0A0E0ANE9	Uncharacterized protein. (273 aa)
	A0A0E0AME6	Complex1_49kDa domain-containing protein. (366 aa)
	A0A0E0AK70	Uncharacterized protein. (144 aa)
	A0A0E0AI28	Uncharacterized protein. (166 aa)
	A0A0E0AHC9	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (133 aa)
	A0A0E0AGD9	Uncharacterized protein. (853 aa)
	A0A0E0A9S9	Uncharacterized protein. (66 aa)
	A0A0E0A7N9	Uncharacterized protein. (861 aa)
	A0A0E0A661	Uncharacterized protein. (163 aa)
	A0A0E0A5S4	Uncharacterized protein. (72 aa)
	A0A0E0A405	Uncharacterized protein. (299 aa)
	A0A0E0A3Q0	Uncharacterized protein. (225 aa)
	A0A0E0A1N4	Uncharacterized protein. (77 aa)
	A0A0E0A1F3	Uncharacterized protein. (278 aa)
	A0A0E0A199	Cyclic nucleotide-binding domain-containing protein. (691 aa)
	A0A0E0A0T4	Uncharacterized protein; Belongs to the cytochrome P450 family. (581 aa)
	A0A0E0A0P3	Protein kinase domain-containing protein. (981 aa)
	A0A0E0A0G8	Ammonium transporter. (486 aa)
	A0A0D9ZZI8	Uncharacterized protein. (861 aa)
	A0A0D9ZYF8	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (145 aa)
	A0A0D9ZYE3	Uncharacterized protein. (1582 aa)
	A0A0D9ZXF4	Uncharacterized protein. (66 aa)
	A0A0D9ZUU4	Uncharacterized protein. (87 aa)
	A0A0D9ZTL8	Uncharacterized protein. (81 aa)
	A0A0D9ZRJ9	Chloride channel protein; Belongs to the chloride channel (TC 2.A.49) family. (1436 aa)
	A0A0D9ZP08	Uncharacterized protein. (1042 aa)
	A0A0D9ZNY6	Uncharacterized protein; Belongs to the MlaE permease family. (345 aa)
	A0A0D9ZN14	Ammonium transporter. (498 aa)
	A0A0D9ZMT3	Uncharacterized protein. (329 aa)
	A0A0D9ZLF3	Gamma-glutamylcyclotransferase; Catalyzes the formation of 5-oxoproline from gamma-glutamyl dipeptides and plays a significant role in glutathione (GSH) homeostasis. (187 aa)
	A0A0D9ZLA6	Uncharacterized protein. (719 aa)
	A0A0D9ZL68	Chloride channel protein; Belongs to the chloride channel (TC 2.A.49) family. (846 aa)
	A0A0D9ZIH6	SCP domain-containing protein. (185 aa)
	A0A0D9ZFL7	Prohibitin. (290 aa)
	A0A0D9ZFJ2	Ammonium transporter. (479 aa)
	A0A0D9ZEW7	Prohibitin. (210 aa)
	A0A0D9ZEV9	PHB domain-containing protein. (403 aa)
	A0A0D9ZD93	EF-hand domain-containing protein. (821 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0D9Y3F9	A0A0D9Y6W1	A0A0D9Y3F9	A0A0D9Y6W1	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A0D9Y3F9	A0A0D9Y9Q8	A0A0D9Y3F9	A0A0D9Y9Q8	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A0D9Y3F9	A0A0D9YF04	A0A0D9Y3F9	A0A0D9YF04	Uncharacterized protein.	Uncharacterized protein.	0.870
A0A0D9Y3F9	A0A0D9YIW8	A0A0D9Y3F9	A0A0D9YIW8	Uncharacterized protein.	Uncharacterized protein.	0.764
A0A0D9Y3F9	A0A0D9YSP6	A0A0D9Y3F9	A0A0D9YSP6	Uncharacterized protein.	Uncharacterized protein.	0.870
A0A0D9Y3F9	A0A0D9YXF3	A0A0D9Y3F9	A0A0D9YXF3	Uncharacterized protein.	Uncharacterized protein.	0.767
A0A0D9Y3F9	A0A0D9Z3A6	A0A0D9Y3F9	A0A0D9Z3A6	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A0D9Y3F9	A0A0D9Z3V2	A0A0D9Y3F9	A0A0D9Z3V2	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.995
A0A0D9Y3F9	A0A0D9Z6C5	A0A0D9Y3F9	A0A0D9Z6C5	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A0D9Y3F9	A0A0D9Z7F1	A0A0D9Y3F9	A0A0D9Z7F1	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.950
A0A0D9Y3F9	A0A0D9Z7F6	A0A0D9Y3F9	A0A0D9Z7F6	Uncharacterized protein.	Uncharacterized protein.	0.950
A0A0D9Y3F9	A0A0D9ZCF2	A0A0D9Y3F9	A0A0D9ZCF2	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A0D9Y3F9	A0A0D9ZCF3	A0A0D9Y3F9	A0A0D9ZCF3	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A0D9Y3F9	A0A0D9ZDS9	A0A0D9Y3F9	A0A0D9ZDS9	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A0D9Y3F9	A0A0D9ZTL8	A0A0D9Y3F9	A0A0D9ZTL8	Uncharacterized protein.	Uncharacterized protein.	0.907
A0A0D9Y3F9	A0A0D9ZYF8	A0A0D9Y3F9	A0A0D9ZYF8	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.950
A0A0D9Y3F9	A0A0E0A1F3	A0A0D9Y3F9	A0A0E0A1F3	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A0D9Y3F9	A0A0E0A5S4	A0A0D9Y3F9	A0A0E0A5S4	Uncharacterized protein.	Uncharacterized protein.	0.764
A0A0D9Y3F9	A0A0E0A9S9	A0A0D9Y3F9	A0A0E0A9S9	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A0D9Y3F9	A0A0E0AHC9	A0A0D9Y3F9	A0A0E0AHC9	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.968