18 items (Oryza glumipatula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9YCS7	Uncharacterized protein. (114 aa)
	A0A0E0BQE5	Uncharacterized protein; Belongs to the GST superfamily. (234 aa)
	A0A0E0BLM6	Aminotran_1_2 domain-containing protein. (477 aa)
	A0A0E0BK70	Aminotran_1_2 domain-containing protein. (429 aa)
	A0A0D9YCT1	Uncharacterized protein. (190 aa)
	A0A0D9YNR3	Fumarylacetoacetase. (429 aa)
	A0A0D9YQX7	Uncharacterized protein. (116 aa)
	A0A0D9YQX8	Aminotran_1_2 domain-containing protein. (434 aa)
	A0A0D9YQY2	Aminotran_1_2 domain-containing protein. (349 aa)
	A0A0D9YQZ7	Aminotran_1_2 domain-containing protein. (502 aa)
	A0A0D9YTS4	Uncharacterized protein; Belongs to the GST superfamily. (234 aa)
	A0A0D9Z0R2	Uncharacterized protein. (228 aa)
	A0A0D9ZA79	Uncharacterized protein. (317 aa)
	A0A0D9ZRP2	Uncharacterized protein. (133 aa)
	A0A0D9ZSL7	Uncharacterized protein. (446 aa)
	A0A0E0A3T8	Uncharacterized protein. (480 aa)
	A0A0E0A990	Aminotran_1_2 domain-containing protein. (268 aa)
	A0A0E0BH87	Uncharacterized protein. (216 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9YCS7	A0A0E0A3T8	Uncharacterized protein.	Uncharacterized protein.	0.724
A0A0D9YCT1	A0A0E0A3T8	Uncharacterized protein.	Uncharacterized protein.	0.724
A0A0D9YNR3	A0A0D9YQX7	Fumarylacetoacetase.	Uncharacterized protein.	0.441
A0A0D9YNR3	A0A0D9YQX8	Fumarylacetoacetase.	Aminotran_1_2 domain-containing protein.	0.441
A0A0D9YNR3	A0A0D9YQY2	Fumarylacetoacetase.	Aminotran_1_2 domain-containing protein.	0.441
A0A0D9YNR3	A0A0D9YQZ7	Fumarylacetoacetase.	Aminotran_1_2 domain-containing protein.	0.441
A0A0D9YNR3	A0A0D9YTS4	Fumarylacetoacetase.	Uncharacterized protein; Belongs to the GST superfamily.	0.966
A0A0D9YNR3	A0A0E0A3T8	Fumarylacetoacetase.	Uncharacterized protein.	0.964
A0A0D9YNR3	A0A0E0A990	Fumarylacetoacetase.	Aminotran_1_2 domain-containing protein.	0.441
A0A0D9YNR3	A0A0E0BH87	Fumarylacetoacetase.	Uncharacterized protein.	0.938
A0A0D9YNR3	A0A0E0BK70	Fumarylacetoacetase.	Aminotran_1_2 domain-containing protein.	0.441
A0A0D9YNR3	A0A0E0BLM6	Fumarylacetoacetase.	Aminotran_1_2 domain-containing protein.	0.441
A0A0D9YNR3	A0A0E0BQE5	Fumarylacetoacetase.	Uncharacterized protein; Belongs to the GST superfamily.	0.937
A0A0D9YQX7	A0A0D9YNR3	Uncharacterized protein.	Fumarylacetoacetase.	0.441
A0A0D9YQX7	A0A0D9ZA79	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A0D9YQX7	A0A0D9ZRP2	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A0D9YQX7	A0A0D9ZSL7	Uncharacterized protein.	Uncharacterized protein.	0.612
A0A0D9YQX7	A0A0E0A3T8	Uncharacterized protein.	Uncharacterized protein.	0.535
A0A0D9YQX8	A0A0D9YNR3	Aminotran_1_2 domain-containing protein.	Fumarylacetoacetase.	0.441
A0A0D9YQX8	A0A0D9ZA79	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.612