65 items (Oryza glumipatula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9Z9K8	Uncharacterized protein. (335 aa)
	A0A0D9ZBW0	Galectin domain-containing protein. (618 aa)
	A0A0D9ZEM1	Galectin domain-containing protein. (650 aa)
	A0A0D9ZEM5	Galectin domain-containing protein. (669 aa)
	A0A0D9ZK60	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...] (114 aa)
	A0A0D9ZLT6	Uncharacterized protein. (119 aa)
	A0A0D9ZLX8	Uncharacterized protein. (235 aa)
	A0A0D9ZLX9	Uncharacterized protein. (239 aa)
	A0A0D9ZLY0	Uncharacterized protein. (195 aa)
	A0A0D9ZLY4	Uncharacterized protein. (117 aa)
	A0A0D9ZNT2	Mannosyltransferase. (338 aa)
	A0A0D9ZPX7	Uncharacterized protein. (418 aa)
	A0A0D9ZQB5	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (572 aa)
	A0A0D9ZSE5	Uncharacterized protein. (721 aa)
	A0A0D9ZSX5	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (487 aa)
	A0A0E0B4F3	Uncharacterized protein. (1078 aa)
	A0A0E0BJL2	Uncharacterized protein. (151 aa)
	A0A0E0BK28	Uncharacterized protein. (485 aa)
	A0A0E0BNZ5	Uncharacterized protein. (462 aa)
	A0A0E0BPL1	Uncharacterized protein. (422 aa)
	A0A0E0BR45	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (397 aa)
	A0A0E0BUK5	Uncharacterized protein. (457 aa)
	A0A0E0BV62	Galectin domain-containing protein. (660 aa)
	A0A0D9ZTF9	Beta-hexosaminidase. (519 aa)
	A0A0D9ZVM6	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (827 aa)
	A0A0D9ZWZ1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (481 aa)
	A0A0D9ZX09	Uncharacterized protein. (194 aa)
	A0A0D9ZYP9	Glyco_hydro_20 domain-containing protein. (199 aa)
	A0A0D9ZZ78	Beta-hexosaminidase. (543 aa)
	A0A0E0A1Q4	Uncharacterized protein. (713 aa)
	A0A0E0A745	Galectin domain-containing protein. (640 aa)
	A0A0E0A7H5	Alpha-mannosidase. (1173 aa)
	A0A0E0AB01	Glyco_trans_4-like_N domain-containing protein. (498 aa)
	A0A0E0AGW1	Galectin domain-containing protein. (655 aa)
	A0A0E0AGW4	Galectin domain-containing protein. (675 aa)
	A0A0E0AH75	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...] (439 aa)
	A0A0E0AIT5	Uncharacterized protein. (253 aa)
	A0A0E0ALR8	Beta-hexosaminidase. (561 aa)
	A0A0E0AQH1	Galectin domain-containing protein. (672 aa)
	A0A0E0AWH9	Uncharacterized protein. (571 aa)
	A0A0E0AXB0	Uncharacterized protein. (541 aa)
	A0A0E0AXK0	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (319 aa)
	A0A0D9Y3X0	Uncharacterized protein. (414 aa)
	A0A0D9Y518	Mannosyltransferase. (577 aa)
	A0A0D9Y7R1	Galectin domain-containing protein. (637 aa)
	A0A0D9YIH5	Beta-hexosaminidase. (524 aa)
	A0A0D9YJ03	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (687 aa)
	A0A0D9YS27	Glyco_tran_28_C domain-containing protein. (127 aa)
	A0A0D9YT44	Uncharacterized protein. (480 aa)
	A0A0D9YU17	Galectin domain-containing protein. (641 aa)
	A0A0D9YU69	Uncharacterized protein. (246 aa)
	A0A0D9YU71	Uncharacterized protein. (176 aa)
	A0A0D9YU76	HMA domain-containing protein. (91 aa)
	A0A0D9YU77	Uncharacterized protein. (109 aa)
	A0A0D9YU78	Uncharacterized protein. (137 aa)
	A0A0D9YZP6	Uncharacterized protein. (441 aa)
	A0A0D9Z0M7	Uncharacterized protein. (426 aa)
	A0A0D9Z2Y9	Glyco_trans_4-like_N domain-containing protein. (451 aa)
	A0A0D9Z3C6	Uncharacterized protein. (127 aa)
	A0A0D9Z419	Beta-hexosaminidase. (617 aa)
	A0A0D9Z617	Uncharacterized protein. (448 aa)
	A0A0D9Z663	Uncharacterized protein. (483 aa)
	A0A0D9Z664	Uncharacterized protein. (449 aa)
	A0A0D9Z7C6	Uncharacterized protein. (391 aa)
	A0A0D9Z925	Uncharacterized protein. (209 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9Y3X0	A0A0D9Y518	Uncharacterized protein.	Mannosyltransferase.	0.998
A0A0D9Y3X0	A0A0D9YIH5	Uncharacterized protein.	Beta-hexosaminidase.	0.743
A0A0D9Y3X0	A0A0D9YJ03	Uncharacterized protein.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	0.743
A0A0D9Y3X0	A0A0D9YS27	Uncharacterized protein.	Glyco_tran_28_C domain-containing protein.	0.495
A0A0D9Y3X0	A0A0D9YZP6	Uncharacterized protein.	Uncharacterized protein.	0.489
A0A0D9Y3X0	A0A0D9Z0M7	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A0D9Y3X0	A0A0D9Z2Y9	Uncharacterized protein.	Glyco_trans_4-like_N domain-containing protein.	0.806
A0A0D9Y3X0	A0A0D9Z419	Uncharacterized protein.	Beta-hexosaminidase.	0.743
A0A0D9Y3X0	A0A0D9Z7C6	Uncharacterized protein.	Uncharacterized protein.	0.487
A0A0D9Y3X0	A0A0D9Z925	Uncharacterized protein.	Uncharacterized protein.	0.487
A0A0D9Y3X0	A0A0D9Z9K8	Uncharacterized protein.	Uncharacterized protein.	0.876
A0A0D9Y3X0	A0A0D9ZNT2	Uncharacterized protein.	Mannosyltransferase.	0.981
A0A0D9Y3X0	A0A0D9ZPX7	Uncharacterized protein.	Uncharacterized protein.	0.712
A0A0D9Y3X0	A0A0D9ZQB5	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.474
A0A0D9Y3X0	A0A0D9ZSE5	Uncharacterized protein.	Uncharacterized protein.	0.821
A0A0D9Y3X0	A0A0D9ZSX5	Uncharacterized protein.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	0.717
A0A0D9Y3X0	A0A0D9ZTF9	Uncharacterized protein.	Beta-hexosaminidase.	0.753
A0A0D9Y3X0	A0A0D9ZVM6	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.493
A0A0D9Y3X0	A0A0D9ZWZ1	Uncharacterized protein.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	0.717
A0A0D9Y3X0	A0A0D9ZX09	Uncharacterized protein.	Uncharacterized protein.	0.717