49 items (Oryza meridionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0DDW2	Uncharacterized protein. (738 aa)
	A0A0E0DE07	Uncharacterized protein. (91 aa)
	A0A0E0CHM1	Protein transport protein sec16. (1521 aa)
	A0A0E0CGH2	ENTH domain-containing protein. (583 aa)
	A0A0E0CF56	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (305 aa)
	A0A0E0CF14	WD_REPEATS_REGION domain-containing protein. (336 aa)
	A0A0E0CF04	F-box domain-containing protein. (274 aa)
	A0A0E0CF03	Uncharacterized protein. (88 aa)
	A0A0E0CEZ0	F-box domain-containing protein. (316 aa)
	A0A0E0CB47	ENTH domain-containing protein. (520 aa)
	A0A0E0DKR9	Uncharacterized protein. (232 aa)
	A0A0E0DL24	ENTH domain-containing protein. (579 aa)
	A0A0E0DQU1	Uncharacterized protein. (115 aa)
	A0A0E0DRL9	ENTH domain-containing protein. (655 aa)
	A0A0E0DS02	Uncharacterized protein. (746 aa)
	A0A0E0DUF9	ENTH domain-containing protein. (566 aa)
	A0A0E0DVJ3	Protein transport protein sec16. (1507 aa)
	A0A0E0DXU2	ENTH domain-containing protein. (565 aa)
	A0A0E0E150	F-box domain-containing protein. (317 aa)
	A0A0E0E3S2	Uncharacterized protein. (299 aa)
	A0A0E0E4S7	ENTH domain-containing protein. (578 aa)
	A0A0E0E537	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (730 aa)
	A0A0E0E6I0	FYVE-type domain-containing protein. (963 aa)
	A0A0E0E8S9	Uncharacterized protein. (264 aa)
	A0A0E0E8T1	FBA_3 domain-containing protein. (337 aa)
	A0A0E0E9I2	F-box domain-containing protein. (406 aa)
	A0A0E0E9K7	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (315 aa)
	A0A0E0F472	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (715 aa)
	A0A0E0EFI8	Uncharacterized protein. (1107 aa)
	A0A0E0EKZ6	Uncharacterized protein. (196 aa)
	A0A0E0EMB2	ENTH domain-containing protein. (399 aa)
	A0A0E0EPW5	Uncharacterized protein. (113 aa)
	A0A0E0EPW6	ANTH domain-containing protein. (133 aa)
	A0A0E0EQ14	Uncharacterized protein. (244 aa)
	A0A0E0ESU5	F-box domain-containing protein. (255 aa)
	A0A0E0EUC9	ANTH domain-containing protein. (271 aa)
	A0A0E0FCS6	ENTH domain-containing protein. (100 aa)
	A0A0E0FBP1	Uncharacterized protein. (1110 aa)
	A0A0E0F913	Uncharacterized protein. (246 aa)
	A0A0E0F5R1	Uncharacterized protein. (1089 aa)
	A0A0E0F5B1	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (793 aa)
	A0A0E0EXR2	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1239 aa)
	A0A0E0F222	Uncharacterized protein. (85 aa)
	A0A0E0F456	ENTH domain-containing protein. (406 aa)
	A0A0E0CMM2	ENTH domain-containing protein. (82 aa)
	A0A0E0CMU9	Uncharacterized protein. (269 aa)
	A0A0E0CSP7	ENTH domain-containing protein. (562 aa)
	A0A0E0D9P5	Arf-GAP domain-containing protein. (412 aa)
	A0A0E0DAB7	Uncharacterized protein. (1031 aa)

Your Current Organism:

Oryza meridionalis

NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0CEZ0	A0A0E0CF56	F-box domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.946
A0A0E0CEZ0	A0A0E0CHM1	F-box domain-containing protein.	Protein transport protein sec16.	0.858
A0A0E0CEZ0	A0A0E0DAB7	F-box domain-containing protein.	Uncharacterized protein.	0.936
A0A0E0CEZ0	A0A0E0DDW2	F-box domain-containing protein.	Uncharacterized protein.	0.917
A0A0E0CEZ0	A0A0E0DS02	F-box domain-containing protein.	Uncharacterized protein.	0.917
A0A0E0CEZ0	A0A0E0DVJ3	F-box domain-containing protein.	Protein transport protein sec16.	0.858
A0A0E0CEZ0	A0A0E0E537	F-box domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.924
A0A0E0CEZ0	A0A0E0E9K7	F-box domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.946
A0A0E0CEZ0	A0A0E0EKZ6	F-box domain-containing protein.	Uncharacterized protein.	0.899
A0A0E0CEZ0	A0A0E0F472	F-box domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.927
A0A0E0CEZ0	A0A0E0F5B1	F-box domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.925
A0A0E0CEZ0	A0A0E0F5R1	F-box domain-containing protein.	Uncharacterized protein.	0.839
A0A0E0CEZ0	A0A0E0FBP1	F-box domain-containing protein.	Uncharacterized protein.	0.839
A0A0E0CF03	A0A0E0CF56	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.946
A0A0E0CF03	A0A0E0CHM1	Uncharacterized protein.	Protein transport protein sec16.	0.858
A0A0E0CF03	A0A0E0DAB7	Uncharacterized protein.	Uncharacterized protein.	0.936
A0A0E0CF03	A0A0E0DDW2	Uncharacterized protein.	Uncharacterized protein.	0.917
A0A0E0CF03	A0A0E0DS02	Uncharacterized protein.	Uncharacterized protein.	0.917
A0A0E0CF03	A0A0E0DVJ3	Uncharacterized protein.	Protein transport protein sec16.	0.858
A0A0E0CF03	A0A0E0E537	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.924