79 items (Oryza meridionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0BWW8	Uncharacterized protein; Belongs to the AAA ATPase family. (485 aa)
	A0A0E0BZE5	Uncharacterized protein. (712 aa)
	A0A0E0BZG9	Uncharacterized protein. (177 aa)
	A0A0E0C415	Uncharacterized protein. (1648 aa)
	A0A0E0C8J1	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (213 aa)
	A0A0E0C9E4	Uncharacterized protein. (280 aa)
	A0A0E0C9N3	Uncharacterized protein. (594 aa)
	A0A0E0CBT6	Vps53_N domain-containing protein. (825 aa)
	A0A0E0CFV7	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (586 aa)
	A0A0E0CFY3	Uncharacterized protein; Belongs to the AAA ATPase family. (435 aa)
	A0A0E0CH11	Uncharacterized protein. (256 aa)
	A0A0E0CH39	Uncharacterized protein. (125 aa)
	A0A0E0CIS2	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (192 aa)
	A0A0E0CJ01	Uncharacterized protein. (618 aa)
	A0A0E0CJ06	Uncharacterized protein. (112 aa)
	A0A0E0CLN7	Uncharacterized protein. (68 aa)
	A0A0E0CMU9	Uncharacterized protein. (269 aa)
	A0A0E0CN02	Uncharacterized protein. (80 aa)
	A0A0E0CNX4	BRO1 domain-containing protein. (350 aa)
	A0A0E0CQ56	Uncharacterized protein. (535 aa)
	A0A0E0CSC3	Uncharacterized protein. (1861 aa)
	A0A0E0CSP8	Uncharacterized protein. (322 aa)
	A0A0E0CTG5	Uncharacterized protein. (1095 aa)
	A0A0E0CTT2	Uncharacterized protein. (241 aa)
	A0A0E0CTW9	Uncharacterized protein. (194 aa)
	A0A0E0CUP1	Uncharacterized protein. (1137 aa)
	A0A0E0CWH9	Uncharacterized protein. (135 aa)
	A0A0E0CX04	WPP domain-containing protein. (158 aa)
	A0A0E0CXT2	Uncharacterized protein. (484 aa)
	A0A0E0D040	Uncharacterized protein. (500 aa)
	A0A0E0D406	Uncharacterized protein. (186 aa)
	A0A0E0D5M6	WASH_WAHD domain-containing protein. (269 aa)
	A0A0E0D6K5	Uncharacterized protein. (771 aa)
	A0A0E0D7F6	Uncharacterized protein. (620 aa)
	A0A0E0D8D7	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (1012 aa)
	A0A0E0DBG1	Vps54 domain-containing protein. (972 aa)
	A0A0E0DBP2	Uncharacterized protein. (971 aa)
	A0A0E0DC36	Uncharacterized protein. (870 aa)
	A0A0E0DE07	Uncharacterized protein. (91 aa)
	A0A0E0DIY5	Uncharacterized protein. (128 aa)
	A0A0E0DJV7	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (668 aa)
	A0A0E0DKR9	Uncharacterized protein. (232 aa)
	A0A0E0DQ44	Uncharacterized protein. (591 aa)
	A0A0E0DSV5	Uncharacterized protein. (693 aa)
	A0A0E0DWD2	Uncharacterized protein. (1086 aa)
	A0A0E0E1A3	Uncharacterized protein. (488 aa)
	A0A0E0E1H7	Uncharacterized protein. (715 aa)
	A0A0E0E3S2	Uncharacterized protein. (299 aa)
	A0A0E0E487	Uncharacterized protein. (205 aa)
	A0A0E0E5J8	Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (995 aa)
	A0A0E0E6M5	Uncharacterized protein. (1188 aa)
	A0A0E0E915	Uncharacterized protein. (616 aa)
	A0A0E0EB70	Uncharacterized protein. (229 aa)
	A0A0E0EBH2	Uncharacterized protein. (208 aa)
	A0A0E0EDR5	DAO domain-containing protein. (125 aa)
	A0A0E0EDW6	WPP domain-containing protein. (372 aa)
	A0A0E0EEB3	Uncharacterized protein. (743 aa)
	A0A0E0EGY6	Uncharacterized protein. (401 aa)
	A0A0E0EHH0	Uncharacterized protein. (147 aa)
	A0A0E0EI65	Uncharacterized protein. (143 aa)
	A0A0E0EQ14	Uncharacterized protein. (244 aa)
	A0A0E0ESM3	Uncharacterized protein. (563 aa)
	A0A0E0ESV3	Uncharacterized protein. (141 aa)
	A0A0E0EU38	Uncharacterized protein. (155 aa)
	A0A0E0EYV9	Uncharacterized protein. (212 aa)
	A0A0E0EZ76	Uncharacterized protein. (697 aa)
	A0A0E0EZF2	BRO1 domain-containing protein. (885 aa)
	A0A0E0F0L9	Uncharacterized protein. (977 aa)
	A0A0E0F1S1	Uncharacterized protein. (94 aa)
	A0A0E0F222	Uncharacterized protein. (85 aa)
	A0A0E0F3A1	Uncharacterized protein. (651 aa)
	A0A0E0F6F9	Uncharacterized protein. (427 aa)
	A0A0E0F7U8	Uncharacterized protein. (303 aa)
	A0A0E0F8G6	DUF295 domain-containing protein. (431 aa)
	A0A0E0F913	Uncharacterized protein. (246 aa)
	A0A0E0FCR4	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (619 aa)
	A0A0E0FD16	Uncharacterized protein. (1263 aa)
	A0A0E0FD50	Uncharacterized protein. (201 aa)
	A0A0E0FE18	Uncharacterized protein. (178 aa)

Your Current Organism:

Oryza meridionalis

NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0BWW8	A0A0E0C8J1	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.670
A0A0E0BWW8	A0A0E0C9E4	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.621
A0A0E0BWW8	A0A0E0CLN7	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.907
A0A0E0BWW8	A0A0E0CMU9	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.993
A0A0E0BWW8	A0A0E0CNX4	Uncharacterized protein; Belongs to the AAA ATPase family.	BRO1 domain-containing protein.	0.814
A0A0E0BWW8	A0A0E0CTT2	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.953
A0A0E0BWW8	A0A0E0CTW9	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.907
A0A0E0BWW8	A0A0E0D406	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.907
A0A0E0BWW8	A0A0E0D7F6	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.814
A0A0E0BWW8	A0A0E0DE07	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.945
A0A0E0BWW8	A0A0E0DKR9	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.967
A0A0E0BWW8	A0A0E0E1A3	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.994
A0A0E0BWW8	A0A0E0E3S2	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.945
A0A0E0BWW8	A0A0E0E487	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.993
A0A0E0BWW8	A0A0E0EB70	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.953
A0A0E0BWW8	A0A0E0EHH0	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.907
A0A0E0BWW8	A0A0E0EI65	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.907
A0A0E0BWW8	A0A0E0EQ14	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.945
A0A0E0BWW8	A0A0E0EU38	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.407
A0A0E0BWW8	A0A0E0EYV9	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.907