26 items (Oryza meridionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0F222	Uncharacterized protein. (85 aa)
	A0A0E0F913	Uncharacterized protein. (246 aa)
	A0A0E0F8G6	DUF295 domain-containing protein. (431 aa)
	A0A0E0F3A1	Uncharacterized protein. (651 aa)
	A0A0E0EZF2	BRO1 domain-containing protein. (885 aa)
	A0A0E0EU38	Uncharacterized protein. (155 aa)
	A0A0E0ESV3	Uncharacterized protein. (141 aa)
	A0A0E0EQ14	Uncharacterized protein. (244 aa)
	A0A0E0EGY6	Uncharacterized protein. (401 aa)
	A0A0E0E3S2	Uncharacterized protein. (299 aa)
	A0A0E0E1H7	Uncharacterized protein. (715 aa)
	A0A0E0E1A3	Uncharacterized protein. (488 aa)
	A0A0E0DSV5	Uncharacterized protein. (693 aa)
	A0A0E0DQ44	Uncharacterized protein. (591 aa)
	A0A0E0DKR9	Uncharacterized protein. (232 aa)
	A0A0E0DE07	Uncharacterized protein. (91 aa)
	A0A0E0D7F6	Uncharacterized protein. (620 aa)
	A0A0E0CSP8	Uncharacterized protein. (322 aa)
	A0A0E0CQ56	Uncharacterized protein. (535 aa)
	A0A0E0CNX4	BRO1 domain-containing protein. (350 aa)
	A0A0E0C9N3	Uncharacterized protein. (594 aa)
	A0A0E0CJ01	Uncharacterized protein. (618 aa)
	A0A0E0CMU9	Uncharacterized protein. (269 aa)
	A0A0E0C9E4	Uncharacterized protein. (280 aa)
	A0A0E0C8J1	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (213 aa)
	A0A0E0BZE5	Uncharacterized protein. (712 aa)

Your Current Organism:

Oryza meridionalis

NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0C8J1	A0A0E0C9E4	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.996
A0A0E0C8J1	A0A0E0CMU9	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.958
A0A0E0C8J1	A0A0E0CNX4	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	BRO1 domain-containing protein.	0.600
A0A0E0C8J1	A0A0E0D7F6	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.600
A0A0E0C8J1	A0A0E0DE07	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.771
A0A0E0C8J1	A0A0E0DKR9	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.604
A0A0E0C8J1	A0A0E0E1A3	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.603
A0A0E0C8J1	A0A0E0E3S2	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.771
A0A0E0C8J1	A0A0E0EQ14	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.771
A0A0E0C8J1	A0A0E0EU38	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.948
A0A0E0C8J1	A0A0E0EZF2	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	BRO1 domain-containing protein.	0.600
A0A0E0C8J1	A0A0E0F222	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.771
A0A0E0C8J1	A0A0E0F8G6	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	DUF295 domain-containing protein.	0.923
A0A0E0C8J1	A0A0E0F913	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.771
A0A0E0C9E4	A0A0E0C8J1	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.996
A0A0E0C9E4	A0A0E0CMU9	Uncharacterized protein.	Uncharacterized protein.	0.993
A0A0E0C9E4	A0A0E0DE07	Uncharacterized protein.	Uncharacterized protein.	0.895
A0A0E0C9E4	A0A0E0DKR9	Uncharacterized protein.	Uncharacterized protein.	0.475
A0A0E0C9E4	A0A0E0E1A3	Uncharacterized protein.	Uncharacterized protein.	0.475
A0A0E0C9E4	A0A0E0E3S2	Uncharacterized protein.	Uncharacterized protein.	0.895