51 items (Oryza meridionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0FBT5	Uncharacterized protein; Belongs to the AAA ATPase family. (699 aa)
	A0A0E0FBY2	Uncharacterized protein. (1106 aa)
	A0A0E0FE18	Uncharacterized protein. (178 aa)
	A0A0E0F9U7	Uncharacterized protein. (2119 aa)
	A0A0E0F913	Uncharacterized protein. (246 aa)
	A0A0E0F816	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1112 aa)
	A0A0E0F5B3	Uncharacterized protein. (221 aa)
	A0A0E0F222	Uncharacterized protein. (85 aa)
	A0A0E0EYV9	Uncharacterized protein. (212 aa)
	A0A0E0EVY0	Uncharacterized protein. (1921 aa)
	A0A0E0EUQ1	Uncharacterized protein. (251 aa)
	A0A0E0EQ14	Uncharacterized protein. (244 aa)
	A0A0E0EMX9	Importin N-terminal domain-containing protein. (872 aa)
	A0A0E0EI65	Uncharacterized protein. (143 aa)
	A0A0E0EHH0	Uncharacterized protein. (147 aa)
	A0A0E0EB70	Uncharacterized protein. (229 aa)
	A0A0E0E9K7	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (315 aa)
	A0A0E0E681	Uncharacterized protein. (1102 aa)
	A0A0E0E5I3	Uncharacterized protein. (753 aa)
	A0A0E0E3S2	Uncharacterized protein. (299 aa)
	A0A0E0E3K4	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (290 aa)
	A0A0E0E185	Nucleoporin_N domain-containing protein. (1455 aa)
	A0A0E0DWU5	Uncharacterized protein. (615 aa)
	A0A0E0DW44	Uncharacterized protein; Belongs to the AAA ATPase family. (487 aa)
	A0A0E0DUC3	WPP domain-containing protein. (544 aa)
	A0A0E0DU14	Nuclear pore complex protein NUP35. (329 aa)
	A0A0E0DQC1	Importin N-terminal domain-containing protein. (868 aa)
	A0A0E0DE07	Uncharacterized protein. (91 aa)
	A0A0E0D7Y1	ML domain-containing protein. (1456 aa)
	A0A0E0D6K2	Uncharacterized protein. (181 aa)
	A0A0E0D5H7	Uncharacterized protein. (367 aa)
	A0A0E0D406	Uncharacterized protein. (186 aa)
	A0A0E0D0K4	Nuclear pore protein. (838 aa)
	A0A0E0CVV5	Peptidase S59 domain-containing protein. (1011 aa)
	A0A0E0CTW9	Uncharacterized protein. (194 aa)
	A0A0E0CTT2	Uncharacterized protein. (241 aa)
	A0A0E0CMU9	Uncharacterized protein. (269 aa)
	A0A0E0CLN7	Uncharacterized protein. (68 aa)
	A0A0E0CL04	Uncharacterized protein. (237 aa)
	A0A0E0CJI9	Uncharacterized protein. (230 aa)
	A0A0E0CIC3	Uncharacterized protein. (240 aa)
	A0A0E0CFX2	Uncharacterized protein. (675 aa)
	A0A0E0CFF9	DUF5311 domain-containing protein. (1476 aa)
	A0A0E0CF56	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (305 aa)
	A0A0E0C7M4	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (674 aa)
	A0A0E0C4K3	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (258 aa)
	A0A0E0C313	Uncharacterized protein. (133 aa)
	A0A0E0C269	Peptidase S59 domain-containing protein. (662 aa)
	A0A0E0BYQ0	Nuclear pore complex protein NUP35. (332 aa)
	A0A0E0CTJ5	Uncharacterized protein. (164 aa)
	A0A0E0CSJ1	Importin N-terminal domain-containing protein. (870 aa)

Your Current Organism:

Oryza meridionalis

NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0BYQ0	A0A0E0C269	Nuclear pore complex protein NUP35.	Peptidase S59 domain-containing protein.	0.837
A0A0E0BYQ0	A0A0E0C4K3	Nuclear pore complex protein NUP35.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.666
A0A0E0BYQ0	A0A0E0C7M4	Nuclear pore complex protein NUP35.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.965
A0A0E0BYQ0	A0A0E0CF56	Nuclear pore complex protein NUP35.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.944
A0A0E0BYQ0	A0A0E0CFF9	Nuclear pore complex protein NUP35.	DUF5311 domain-containing protein.	0.967
A0A0E0BYQ0	A0A0E0CIC3	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.837
A0A0E0BYQ0	A0A0E0CVV5	Nuclear pore complex protein NUP35.	Peptidase S59 domain-containing protein.	0.858
A0A0E0BYQ0	A0A0E0D0K4	Nuclear pore complex protein NUP35.	Nuclear pore protein.	0.981
A0A0E0BYQ0	A0A0E0D7Y1	Nuclear pore complex protein NUP35.	ML domain-containing protein.	0.837
A0A0E0BYQ0	A0A0E0DU14	Nuclear pore complex protein NUP35.	Nuclear pore complex protein NUP35.	0.879
A0A0E0BYQ0	A0A0E0DUC3	Nuclear pore complex protein NUP35.	WPP domain-containing protein.	0.809
A0A0E0BYQ0	A0A0E0E185	Nuclear pore complex protein NUP35.	Nucleoporin_N domain-containing protein.	0.993
A0A0E0BYQ0	A0A0E0E3K4	Nuclear pore complex protein NUP35.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.666
A0A0E0BYQ0	A0A0E0E9K7	Nuclear pore complex protein NUP35.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.944
A0A0E0BYQ0	A0A0E0EVY0	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.971
A0A0E0BYQ0	A0A0E0F816	Nuclear pore complex protein NUP35.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.976
A0A0E0BYQ0	A0A0E0F9U7	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.837
A0A0E0BYQ0	A0A0E0FBY2	Nuclear pore complex protein NUP35.	Uncharacterized protein.	0.857
A0A0E0C269	A0A0E0BYQ0	Peptidase S59 domain-containing protein.	Nuclear pore complex protein NUP35.	0.837
A0A0E0C269	A0A0E0C4K3	Peptidase S59 domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.752