(11 nodes) t-UTP complex, and Pwp2p-containing subcomplex of 90S preribosome network (Ceraceosorus bombacis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0N7L9E5	WD40 repeat protein. (1079 aa)
	A0A0P1B9C5	U3 small nucleolar RNA-associated protein 22. (1115 aa)
	A0A0P1BAI7	UTP4, CIRH1A. (130 aa)
	A0A0P1BDX8	HAT (Half-A-TPR) repeat-containing protein. (917 aa)
	A0A0P1BHL2	Conserved WD40 repeat-containing protein. (601 aa)
	A0A0P1BID2	WD40-repeat-containing subunit of the 18S rRNA processing complex. (1057 aa)
	A0A0P1BJE4	Uncharacterized conserved protein. (1658 aa)
	A0A0P1BM15	DRIM (Down-regulated in metastasis)-like proteins. (2860 aa)
	A0A0P1BM90	WD repeat protein. (1263 aa)
	A0A0P1BQG0	WD40-repeat-containing subunit of the 18S rRNA processing complex. (926 aa)
	A0A0P1BRU2	WD40-repeat-containing subunit of the 18S rRNA processing complex. (674 aa)

Your Current Organism:

Ceraceosorus bombacis

NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0N7L9E5	A0A0P1B9C5	WD40 repeat protein.	U3 small nucleolar RNA-associated protein 22.	0.999
A0A0N7L9E5	A0A0P1BAI7	WD40 repeat protein.	UTP4, CIRH1A.	0.999
A0A0N7L9E5	A0A0P1BDX8	WD40 repeat protein.	HAT (Half-A-TPR) repeat-containing protein.	0.999
A0A0N7L9E5	A0A0P1BHL2	WD40 repeat protein.	Conserved WD40 repeat-containing protein.	0.999
A0A0N7L9E5	A0A0P1BID2	WD40 repeat protein.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.997
A0A0N7L9E5	A0A0P1BJE4	WD40 repeat protein.	Uncharacterized conserved protein.	0.999
A0A0N7L9E5	A0A0P1BM15	WD40 repeat protein.	DRIM (Down-regulated in metastasis)-like proteins.	0.999
A0A0N7L9E5	A0A0P1BM90	WD40 repeat protein.	WD repeat protein.	0.998
A0A0N7L9E5	A0A0P1BQG0	WD40 repeat protein.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.999
A0A0N7L9E5	A0A0P1BRU2	WD40 repeat protein.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.999
A0A0P1B9C5	A0A0N7L9E5	U3 small nucleolar RNA-associated protein 22.	WD40 repeat protein.	0.999
A0A0P1B9C5	A0A0P1BAI7	U3 small nucleolar RNA-associated protein 22.	UTP4, CIRH1A.	0.999
A0A0P1B9C5	A0A0P1BDX8	U3 small nucleolar RNA-associated protein 22.	HAT (Half-A-TPR) repeat-containing protein.	0.999
A0A0P1B9C5	A0A0P1BHL2	U3 small nucleolar RNA-associated protein 22.	Conserved WD40 repeat-containing protein.	0.991
A0A0P1B9C5	A0A0P1BID2	U3 small nucleolar RNA-associated protein 22.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.999
A0A0P1B9C5	A0A0P1BJE4	U3 small nucleolar RNA-associated protein 22.	Uncharacterized conserved protein.	0.999
A0A0P1B9C5	A0A0P1BM15	U3 small nucleolar RNA-associated protein 22.	DRIM (Down-regulated in metastasis)-like proteins.	0.999
A0A0P1B9C5	A0A0P1BM90	U3 small nucleolar RNA-associated protein 22.	WD repeat protein.	0.999
A0A0P1B9C5	A0A0P1BQG0	U3 small nucleolar RNA-associated protein 22.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.999
A0A0P1B9C5	A0A0P1BRU2	U3 small nucleolar RNA-associated protein 22.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.999