(26 nodes) 90S preribosome network (Ceraceosorus bombacis)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

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protein homology

Your Input:
	A0A0P1BID2	WD40-repeat-containing subunit of the 18S rRNA processing complex. (1057 aa)
	A0A0P1BJJ4	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (452 aa)
	NAT10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1146 aa)
	A0A0P1BB61	Apoptosis antagonizing transcription factor/protein transport protein. (534 aa)
	A0A0P1B9C5	U3 small nucleolar RNA-associated protein 22. (1115 aa)
	A0A0N7LAK2	Predicted nucleolar protein involved in ribosome biogenesis. (788 aa)
	A0A0N7L9I9	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (627 aa)
	A0A0N7L9I3	Brix-domain-containing protein. (300 aa)
	A0A0N7L9D0	Uncharacterized conserved protein. (406 aa)
	A0A0N7L970	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family. (582 aa)
	A0A0P1BL98	RNA 3'-terminal phosphate cyclase. (413 aa)
	A0A0P1BM90	WD repeat protein. (1263 aa)
	A0A0P1BMH8	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (319 aa)
	A0A0P1BMS8	Alpha-l rna-binding motif-containing protein. (182 aa)
	A0A0P1BMW0	Predicted DEAD-box-containing helicase. (354 aa)
	A0A0P1BQ87	WD40 repeat protein. (648 aa)
	A0A0P1BQG0	WD40-repeat-containing subunit of the 18S rRNA processing complex. (926 aa)
	A0A0P1BQU3	Atp-dependent rna helicase has1; Belongs to the DEAD box helicase family. (521 aa)
	A0A0P1BMY2	Uncharacterized protein. (198 aa)
	A0A0P1BPG0	Uncharacterized protein. (738 aa)
	A0A0P1BBZ8	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (792 aa)
	A0A0P1BDX8	HAT (Half-A-TPR) repeat-containing protein. (917 aa)
	A0A0P1BBD8	Nucleolar protein involved in 40S ribosome biogenesis. (990 aa)
	A0A0P1BF52	rRNA processing protein RRP7. (409 aa)
	A0A0P1BGB6	Related to nop15-protein involved in 60s ribosomal subunit biogenesis. (384 aa)
	A0A0P1BI09	Related to nop6-protein with possible role in rrna processing. (377 aa)

Your Current Organism:

Ceraceosorus bombacis

NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0N7L970	A0A0N7L9D0	A0A0N7L970	A0A0N7L9D0	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Uncharacterized conserved protein.	0.811
A0A0N7L970	A0A0N7L9I3	A0A0N7L970	A0A0N7L9I3	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Brix-domain-containing protein.	0.684
A0A0N7L970	A0A0N7L9I9	A0A0N7L970	A0A0N7L9I9	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.	0.809
A0A0N7L970	A0A0N7LAK2	A0A0N7L970	A0A0N7LAK2	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Predicted nucleolar protein involved in ribosome biogenesis.	0.908
A0A0N7L970	A0A0P1B9C5	A0A0N7L970	A0A0P1B9C5	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	U3 small nucleolar RNA-associated protein 22.	0.986
A0A0N7L970	A0A0P1BB61	A0A0N7L970	A0A0P1BB61	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Apoptosis antagonizing transcription factor/protein transport protein.	0.933
A0A0N7L970	A0A0P1BBD8	A0A0N7L970	A0A0P1BBD8	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Nucleolar protein involved in 40S ribosome biogenesis.	0.965
A0A0N7L970	A0A0P1BBZ8	A0A0N7L970	A0A0P1BBZ8	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	0.904
A0A0N7L970	A0A0P1BDX8	A0A0N7L970	A0A0P1BDX8	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	HAT (Half-A-TPR) repeat-containing protein.	0.859
A0A0N7L970	A0A0P1BF52	A0A0N7L970	A0A0P1BF52	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	rRNA processing protein RRP7.	0.878
A0A0N7L970	A0A0P1BGB6	A0A0N7L970	A0A0P1BGB6	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Related to nop15-protein involved in 60s ribosomal subunit biogenesis.	0.762
A0A0N7L970	A0A0P1BID2	A0A0N7L970	A0A0P1BID2	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.560
A0A0N7L970	A0A0P1BL98	A0A0N7L970	A0A0P1BL98	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	RNA 3'-terminal phosphate cyclase.	0.652
A0A0N7L970	A0A0P1BM90	A0A0N7L970	A0A0P1BM90	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	WD repeat protein.	0.745
A0A0N7L970	A0A0P1BMS8	A0A0N7L970	A0A0P1BMS8	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Alpha-l rna-binding motif-containing protein.	0.807
A0A0N7L970	A0A0P1BMW0	A0A0N7L970	A0A0P1BMW0	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Predicted DEAD-box-containing helicase.	0.656
A0A0N7L970	A0A0P1BPG0	A0A0N7L970	A0A0P1BPG0	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.805
A0A0N7L970	A0A0P1BQ87	A0A0N7L970	A0A0P1BQ87	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	WD40 repeat protein.	0.762
A0A0N7L970	A0A0P1BQG0	A0A0N7L970	A0A0P1BQG0	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.873
A0A0N7L970	A0A0P1BQU3	A0A0N7L970	A0A0P1BQU3	Probable rok1-atp-dependent rna helicase; Belongs to the DEAD box helicase family.	Atp-dependent rna helicase has1; Belongs to the DEAD box helicase family.	0.929