(11 nodes) Preribosome, small subunit precursor network (Ceraceosorus bombacis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0P1BKQ7	Related to rio2 protein. (620 aa)
	A0A0N7LAK2	Predicted nucleolar protein involved in ribosome biogenesis. (788 aa)
	A0A0P1B7Y5	Uncharacterized conserved protein. (1546 aa)
	A0A0P1B8B6	Predicted RNA-binding protein, contains Pumilio domains. (819 aa)
	A0A0P1BAC2	Cell adhesion complex protein bystin. (534 aa)
	A0A0P1BBD8	Nucleolar protein involved in 40S ribosome biogenesis. (990 aa)
	A0A0P1BBM9	Uncharacterized conserved protein. (248 aa)
	A0A0P1BCI2	Uncharacterized conserved protein. (733 aa)
	A0A0P1BEZ3	Nucleolar protein NOP52/RRP1. (387 aa)
	A0A0P1BGB6	Related to nop15-protein involved in 60s ribosomal subunit biogenesis. (384 aa)
	A0A0P1BM15	DRIM (Down-regulated in metastasis)-like proteins. (2860 aa)

Your Current Organism:

Ceraceosorus bombacis

NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0N7LAK2	A0A0P1B7Y5	Predicted nucleolar protein involved in ribosome biogenesis.	Uncharacterized conserved protein.	0.747
A0A0N7LAK2	A0A0P1B8B6	Predicted nucleolar protein involved in ribosome biogenesis.	Predicted RNA-binding protein, contains Pumilio domains.	0.519
A0A0N7LAK2	A0A0P1BAC2	Predicted nucleolar protein involved in ribosome biogenesis.	Cell adhesion complex protein bystin.	0.999
A0A0N7LAK2	A0A0P1BBD8	Predicted nucleolar protein involved in ribosome biogenesis.	Nucleolar protein involved in 40S ribosome biogenesis.	0.999
A0A0N7LAK2	A0A0P1BCI2	Predicted nucleolar protein involved in ribosome biogenesis.	Uncharacterized conserved protein.	0.821
A0A0N7LAK2	A0A0P1BEZ3	Predicted nucleolar protein involved in ribosome biogenesis.	Nucleolar protein NOP52/RRP1.	0.887
A0A0N7LAK2	A0A0P1BGB6	Predicted nucleolar protein involved in ribosome biogenesis.	Related to nop15-protein involved in 60s ribosomal subunit biogenesis.	0.836
A0A0N7LAK2	A0A0P1BKQ7	Predicted nucleolar protein involved in ribosome biogenesis.	Related to rio2 protein.	0.655
A0A0N7LAK2	A0A0P1BM15	Predicted nucleolar protein involved in ribosome biogenesis.	DRIM (Down-regulated in metastasis)-like proteins.	0.998
A0A0P1B7Y5	A0A0N7LAK2	Uncharacterized conserved protein.	Predicted nucleolar protein involved in ribosome biogenesis.	0.747
A0A0P1B7Y5	A0A0P1B8B6	Uncharacterized conserved protein.	Predicted RNA-binding protein, contains Pumilio domains.	0.816
A0A0P1B7Y5	A0A0P1BAC2	Uncharacterized conserved protein.	Cell adhesion complex protein bystin.	0.999
A0A0P1B7Y5	A0A0P1BBD8	Uncharacterized conserved protein.	Nucleolar protein involved in 40S ribosome biogenesis.	0.930
A0A0P1B7Y5	A0A0P1BCI2	Uncharacterized conserved protein.	Uncharacterized conserved protein.	0.999
A0A0P1B7Y5	A0A0P1BEZ3	Uncharacterized conserved protein.	Nucleolar protein NOP52/RRP1.	0.753
A0A0P1B7Y5	A0A0P1BGB6	Uncharacterized conserved protein.	Related to nop15-protein involved in 60s ribosomal subunit biogenesis.	0.833
A0A0P1B7Y5	A0A0P1BKQ7	Uncharacterized conserved protein.	Related to rio2 protein.	0.999
A0A0P1B7Y5	A0A0P1BM15	Uncharacterized conserved protein.	DRIM (Down-regulated in metastasis)-like proteins.	0.748
A0A0P1B8B6	A0A0N7LAK2	Predicted RNA-binding protein, contains Pumilio domains.	Predicted nucleolar protein involved in ribosome biogenesis.	0.519
A0A0P1B8B6	A0A0P1B7Y5	Predicted RNA-binding protein, contains Pumilio domains.	Uncharacterized conserved protein.	0.816