(10 nodes) EAL domain, and Periplasmic binding proteins and sugar binding domain of LacI family network (Lechevalieria xinjiangensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SEQ11222.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (631 aa)
	SEQ82127.1	DNA-binding transcriptional regulator, LacI/PurR family. (1005 aa)
	SER18002.1	Diguanylate cyclase (GGDEF) domain-containing protein. (651 aa)
	SER18188.1	Diguanylate cyclase (GGDEF) domain-containing protein. (640 aa)
	SER26970.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (1058 aa)
	SER40501.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (611 aa)
	SER60109.1	Signal transduction histidine kinase. (1382 aa)
	SES04790.1	Response regulator receiver domain-containing protein. (142 aa)
	SES04809.1	DNA-binding transcriptional regulator, LacI/PurR family. (937 aa)
	SES07526.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (902 aa)

Your Current Organism:

Lechevalieria xinjiangensis

NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEQ11222.1	SEQ82127.1	SAMN05216188_102103	SAMN05216188_105224	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	DNA-binding transcriptional regulator, LacI/PurR family.	0.997
SEQ11222.1	SER18002.1	SAMN05216188_102103	SAMN05216188_108223	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.954
SEQ11222.1	SER18188.1	SAMN05216188_102103	SAMN05216188_108231	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.954
SEQ11222.1	SER26970.1	SAMN05216188_102103	SAMN05216188_109237	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.994
SEQ11222.1	SER40501.1	SAMN05216188_102103	SAMN05216188_11141	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.964
SEQ11222.1	SER60109.1	SAMN05216188_102103	SAMN05216188_11352	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Signal transduction histidine kinase.	0.999
SEQ11222.1	SES04790.1	SAMN05216188_102103	SAMN05216188_120102	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Response regulator receiver domain-containing protein.	0.933
SEQ11222.1	SES04809.1	SAMN05216188_102103	SAMN05216188_120103	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	DNA-binding transcriptional regulator, LacI/PurR family.	0.966
SEQ11222.1	SES07526.1	SAMN05216188_102103	SAMN05216188_12150	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.949
SEQ82127.1	SEQ11222.1	SAMN05216188_105224	SAMN05216188_102103	DNA-binding transcriptional regulator, LacI/PurR family.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.997
SEQ82127.1	SER18002.1	SAMN05216188_105224	SAMN05216188_108223	DNA-binding transcriptional regulator, LacI/PurR family.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.999
SEQ82127.1	SER18188.1	SAMN05216188_105224	SAMN05216188_108231	DNA-binding transcriptional regulator, LacI/PurR family.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.999
SEQ82127.1	SER26970.1	SAMN05216188_105224	SAMN05216188_109237	DNA-binding transcriptional regulator, LacI/PurR family.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.999
SEQ82127.1	SER40501.1	SAMN05216188_105224	SAMN05216188_11141	DNA-binding transcriptional regulator, LacI/PurR family.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.996
SEQ82127.1	SER60109.1	SAMN05216188_105224	SAMN05216188_11352	DNA-binding transcriptional regulator, LacI/PurR family.	Signal transduction histidine kinase.	0.999
SEQ82127.1	SES04790.1	SAMN05216188_105224	SAMN05216188_120102	DNA-binding transcriptional regulator, LacI/PurR family.	Response regulator receiver domain-containing protein.	0.999
SEQ82127.1	SES04809.1	SAMN05216188_105224	SAMN05216188_120103	DNA-binding transcriptional regulator, LacI/PurR family.	DNA-binding transcriptional regulator, LacI/PurR family.	0.999
SEQ82127.1	SES07526.1	SAMN05216188_105224	SAMN05216188_12150	DNA-binding transcriptional regulator, LacI/PurR family.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.999
SER18002.1	SEQ11222.1	SAMN05216188_108223	SAMN05216188_102103	Diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.954
SER18002.1	SEQ82127.1	SAMN05216188_108223	SAMN05216188_105224	Diguanylate cyclase (GGDEF) domain-containing protein.	DNA-binding transcriptional regulator, LacI/PurR family.	0.999