STRINGSTRING
SER52202.1 SER52202.1 SEP66204.1 SEP66204.1 whiB whiB SEP66239.1 SEP66239.1 SEP74616.1 SEP74616.1 SEP75015.1 SEP75015.1 purF purF SEP84874.1 SEP84874.1 SEP84907.1 SEP84907.1 nuoB nuoB SEP85318.1 SEP85318.1 SEP85345.1 SEP85345.1 SEP85371.1 SEP85371.1 nuoI nuoI SEP85991.1 SEP85991.1 SEP86062.1 SEP86062.1 whiB-2 whiB-2 SEP92410.1 SEP92410.1 SEP92641.1 SEP92641.1 SEQ11546.1 SEQ11546.1 SEQ11564.1 SEQ11564.1 SEQ11634.1 SEQ11634.1 SEQ11657.1 SEQ11657.1 SEQ13463.1 SEQ13463.1 SEQ14857.1 SEQ14857.1 ispH ispH SEQ17798.1 SEQ17798.1 pqqE pqqE SEQ18169.1 SEQ18169.1 moaA moaA thiC thiC SEQ29308.1 SEQ29308.1 SEQ29671.1 SEQ29671.1 SEQ32057.1 SEQ32057.1 nth nth whiB-3 whiB-3 SEQ33418.1 SEQ33418.1 SEQ48370.1 SEQ48370.1 SEQ50367.1 SEQ50367.1 SEQ50390.1 SEQ50390.1 SEQ51104.1 SEQ51104.1 SEQ51602.1 SEQ51602.1 bioB bioB rimO rimO SEQ63517.1 SEQ63517.1 lipA lipA SEQ65767.1 SEQ65767.1 SEQ67141.1 SEQ67141.1 SEQ67456.1 SEQ67456.1 SEQ61310.1 SEQ61310.1 SEQ61368.1 SEQ61368.1 SEQ61400.1 SEQ61400.1 edd edd SEQ69055.1 SEQ69055.1 miaB miaB SEQ70917.1 SEQ70917.1 SEQ71238.1 SEQ71238.1 SEQ79543.1 SEQ79543.1 SEQ80100.1 SEQ80100.1 SEQ81012.1 SEQ81012.1 SEQ81568.1 SEQ81568.1 SEQ77557.1 SEQ77557.1 SEQ89579.1 SEQ89579.1 whiB-4 whiB-4 SEQ91663.1 SEQ91663.1 SEQ91876.1 SEQ91876.1 SEQ87759.1 SEQ87759.1 SER07660.1 SER07660.1 SER15658.1 SER15658.1 SER15689.1 SER15689.1 SER15716.1 SER15716.1 ispH-2 ispH-2 ispG ispG SER26307.1 SER26307.1 whiB-5 whiB-5 SER33948.1 SER33948.1 SER43731.1 SER43731.1 SER44678.1 SER44678.1 SER46072.1 SER46072.1 SER41161.1 SER41161.1 SER41269.1 SER41269.1 SER41346.1 SER41346.1 whiB-6 whiB-6 ilvD ilvD leuC leuC ispH-3 ispH-3 SER62668.1 SER62668.1 SER64311.1 SER64311.1 ilvD-2 ilvD-2 SER60497.1 SER60497.1 SER68656.1 SER68656.1 SER70328.1 SER70328.1 SER77791.1 SER77791.1 SER77891.1 SER77891.1 whiB-7 whiB-7 SER75984.1 SER75984.1 SER82121.1 SER82121.1 SER82991.1 SER82991.1 SER92417.1 SER92417.1 SER96537.1 SER96537.1 SER96982.1 SER96982.1 SER97023.1 SER97023.1 whiB-8 whiB-8 SES01011.1 SES01011.1 SES01085.1 SES01085.1 SES03360.1 SES03360.1 SES05492.1 SES05492.1 SES05545.1 SES05545.1 SES05564.1 SES05564.1 SES04519.1 SES04519.1 SES04534.1 SES04534.1 SES11500.1 SES11500.1 SES14180.1 SES14180.1 SES21575.1 SES21575.1 SES21592.1 SES21592.1 SES23549.1 SES23549.1 SES23570.1 SES23570.1 SES26640.1 SES26640.1 ispG-2 ispG-2 SES34026.1 SES34026.1 purF-2 purF-2 SES35489.1 SES35489.1 SES36118.1 SES36118.1 SES36344.1 SES36344.1 rlmN rlmN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SER52202.1Cysteine desulfurase. (389 aa)
SEP66204.1L-lactate dehydrogenase complex protein LldE. (237 aa)
whiBTranscription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (101 aa)
SEP66239.1L-lactate dehydrogenase complex protein LldF. (472 aa)
SEP74616.1Fe-S oxidoreductase. (753 aa)
SEP75015.1NAD(P)H-flavin reductase; Belongs to the globin family. (367 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (501 aa)
SEP84874.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. (163 aa)
SEP84907.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. (351 aa)
nuoBNADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (183 aa)
SEP85318.1NADH dehydrogenase subunit E. (239 aa)
SEP85345.1NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (432 aa)
SEP85371.1NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (821 aa)
nuoINADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (177 aa)
SEP85991.1NADH-quinone oxidoreductase subunit B. (175 aa)
SEP86062.1NADH-quinone oxidoreductase subunit I. (150 aa)
whiB-2WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (98 aa)
SEP92410.1FO synthase subunit 1 /FO synthase subunit 2. (822 aa)
SEP92641.1Succinate dehydrogenase subunit B. (260 aa)
SEQ11546.1Nitrite reductase (NADH) small subunit. (104 aa)
SEQ11564.1Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (822 aa)
SEQ11634.1Assimilatory nitrate reductase electron transfer subunit. (490 aa)
SEQ11657.1Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (638 aa)
SEQ13463.1ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (381 aa)
SEQ14857.1NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (108 aa)
ispH4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (314 aa)
SEQ17798.1Pyrroloquinoline quinone biosynthesis protein D. (92 aa)
pqqEPyrroloquinoline quinone biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). (359 aa)
SEQ18169.1uracil-DNA glycosylase, family 4. (189 aa)
moaACyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (371 aa)
thiCPhosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. (551 aa)
SEQ29308.1A/G-specific DNA-adenine glycosylase. (289 aa)
SEQ29671.1FhuF 2Fe-2S C-terminal domain-containing protein. (265 aa)
SEQ32057.1Transcriptional regulator, BadM/Rrf2 family. (142 aa)
nthDNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (254 aa)
whiB-3Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (96 aa)
SEQ33418.1Isoquinoline 1-oxidoreductase, alpha subunit. (156 aa)
SEQ48370.1Ferredoxin. (63 aa)
SEQ50367.1Glutamate synthase (NADPH/NADH) small chain. (501 aa)
SEQ50390.1Glutamate synthase (NADPH/NADH) large chain. (1507 aa)
SEQ51104.1Transketolase. (220 aa)
SEQ51602.1Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (339 aa)
bioBBiotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (338 aa)
rimOSSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (461 aa)
SEQ63517.1Ferredoxin. (63 aa)
lipALipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (331 aa)
SEQ65767.1Ferredoxin, 2Fe-2S. (107 aa)
SEQ67141.1Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (122 aa)
SEQ67456.1Menaquinol-cytochrome c reductase iron-sulfur subunit precursor. (375 aa)
SEQ61310.1Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. (231 aa)
SEQ61368.1Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (559 aa)
SEQ61400.1Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (402 aa)
edd6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (618 aa)
SEQ69055.1Succinate dehydrogenase subunit B. (249 aa)
miaBtRNA-2-methylthio-N6-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (488 aa)
SEQ70917.1Radical SAM superfamily protein. (266 aa)
SEQ71238.1Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (551 aa)
SEQ79543.1Ferredoxin. (64 aa)
SEQ80100.1HEXXH motif-containing protein. (605 aa)
SEQ81012.1Oxygen-independent coproporphyrinogen-3 oxidase. (461 aa)
SEQ81568.1Phthalate 4,5-dioxygenase, reductase subunit. (320 aa)
SEQ77557.1Ferredoxin. (64 aa)
SEQ89579.1Ferredoxin-NADP reductase. (351 aa)
whiB-4WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (95 aa)
SEQ91663.1Phenylpropionate dioxygenase, large terminal subunit. (320 aa)
SEQ91876.1Isoquinoline 1-oxidoreductase, alpha subunit. (156 aa)
SEQ87759.1Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. (577 aa)
SER07660.1Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. (301 aa)
SER15658.1NAD-dependent formate dehydrogenase iron-sulfur protein. (307 aa)
SER15689.1NAD-dependent formate dehydrogenase flavoprotein subunit. (589 aa)
SER15716.1NAD-dependent formate dehydrogenase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (641 aa)
ispH-24-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (319 aa)
ispG4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (375 aa)
SER26307.1L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa)
whiB-5Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (84 aa)
SER33948.1Xanthine dehydrogenase YagT iron-sulfur-binding subunit. (161 aa)
SER43731.1Intein C-terminal splicing region/intein N-terminal splicing region. (625 aa)
SER44678.1Hemerythrin HHE cation binding domain-containing protein. (179 aa)
SER46072.1Xanthine dehydrogenase YagT iron-sulfur-binding subunit. (196 aa)
SER41161.1Hypothetical protein. (192 aa)
SER41269.1Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (722 aa)
SER41346.1Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (571 aa)
whiB-6WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (99 aa)
ilvDDihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (614 aa)
leuC3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (468 aa)
ispH-34-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (313 aa)
SER62668.1Sulfoxide reductase heme-binding subunit YedZ. (275 aa)
SER64311.1DNA polymerase. (207 aa)
ilvD-2Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. (562 aa)
SER60497.1Glycine/D-amino acid oxidase. (492 aa)
SER68656.1Ferric iron reductase protein FhuF, involved in iron transport. (216 aa)
SER70328.12Fe-2S iron-sulfur cluster binding domain-containing protein. (60 aa)
SER77791.1Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. (374 aa)
SER77891.1CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. (213 aa)
whiB-7WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (106 aa)
SER75984.1Divergent 4Fe-4S mono-cluster. (77 aa)
SER82121.1FAD/FMN-containing dehydrogenase. (866 aa)
SER82991.1Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (946 aa)
SER92417.1Carbon-monoxide dehydrogenase small subunit. (153 aa)
SER96537.1Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (762 aa)
SER96982.1Radical SAM family uncharacterized protein. (653 aa)
SER97023.1Radical SAM-linked protein. (241 aa)
whiB-8WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (88 aa)
SES01011.1Hypothetical protein. (181 aa)
SES01085.1L-lysine 2,3-aminomutase. (462 aa)
SES03360.1Hypothetical protein. (124 aa)
SES05492.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. (104 aa)
SES05545.1Nitrogen fixation protein NifU. (146 aa)
SES05564.1Metal-sulfur cluster biosynthetic enzyme. (128 aa)
SES04519.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (127 aa)
SES04534.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (157 aa)
SES11500.1Hypothetical protein. (181 aa)
SES14180.1Spore photoproduct lyase family protein. (355 aa)
SES21575.1Uncharacterized membrane protein. (177 aa)
SES21592.1Hypothetical protein. (227 aa)
SES23549.13-ketosteroid 9alpha-monooxygenase subunit B. (322 aa)
SES23570.13-ketosteroid 9alpha-monooxygenase subunit A. (373 aa)
SES26640.1Hypothetical protein. (71 aa)
ispG-24-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (384 aa)
SES34026.1Ferredoxin. (63 aa)
purF-2Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (465 aa)
SES35489.1Iron-binding zinc finger CDGSH type. (66 aa)
SES36118.14Fe-4S single cluster domain-containing protein. (284 aa)
SES36344.1Fe-S cluster assembly iron-binding protein IscA. (100 aa)
rlmN23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (368 aa)
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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