(52 nodes) GAF-like domain superfamily network (Lechevalieria xinjiangensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SES32541.1	DNA-binding transcriptional regulator, IclR family. (232 aa)
	SER46237.1	ANTAR domain-containing protein. (232 aa)
	SER53431.1	Transcriptional regulator, IclR family. (225 aa)
	SER55175.1	Transcriptional regulator, IclR family. (248 aa)
	SER50252.1	GAF domain-containing protein. (503 aa)
	SER62094.1	Signal transduction histidine kinase. (553 aa)
	SER60082.1	Serine phosphatase RsbU, regulator of sigma subunit. (461 aa)
	SER60109.1	Signal transduction histidine kinase. (1382 aa)
	SER60875.1	GAF modulated transcriptional regulator, LuxR family. (268 aa)
	SER72345.1	GAF domain-containing protein. (256 aa)
	SER72365.1	GAF domain-containing protein. (240 aa)
	SER72391.1	Stage II sporulation protein E (SpoIIE). (489 aa)
	SER72709.1	ANTAR domain-containing protein. (219 aa)
	SER72730.1	ANTAR domain-containing protein. (252 aa)
	SER69724.1	Transcriptional regulator, IclR family. (254 aa)
	SES00156.1	Hypothetical protein. (146 aa)
	SES01051.1	sigma-B regulation protein RsbU (phosphoserine phosphatase). (487 aa)
	SER46215.1	GAF domain-containing protein. (243 aa)
	SER46192.1	ANTAR domain-containing protein. (230 aa)
	SER32204.1	Sugar diacid utilization regulator. (515 aa)
	SER26809.1	Transcriptional regulator, IclR family. (271 aa)
	SER00709.1	Signal transduction histidine kinase. (557 aa)
	SEQ87534.1	GAF domain-containing protein. (374 aa)
	SEQ87382.1	GAF domain-containing protein. (283 aa)
	SES06892.1	GAF domain-containing protein. (256 aa)
	SES07676.1	ANTAR domain-containing protein. (242 aa)
	SES07696.1	GAF domain-containing protein. (251 aa)
	SES18314.1	Hypothetical protein. (438 aa)
	SES18971.1	ANTAR domain-containing protein. (236 aa)
	SES18985.1	GAF domain-containing protein. (266 aa)
	SES22673.1	Transcriptional regulator, IclR family. (315 aa)
	SES25095.1	Transcriptional regulator, IclR family. (253 aa)
	SES30431.1	Transcriptional regulator, IclR family. (273 aa)
	SES32555.1	Transcriptional regulator, IclR family. (259 aa)
	SES32299.1	Transcriptional regulator, IclR family. (277 aa)
	SES36714.1	Transcriptional regulator, IclR family. (254 aa)
	SEQ93629.1	GAF sensor hybrid histidine kinase. (1509 aa)
	SEQ92032.1	PAS/PAC sensor hybrid histidine kinase. (1413 aa)
	SEQ91249.1	Serine phosphatase RsbU, regulator of sigma subunit. (483 aa)
	SEP66166.1	Two-component system, LytT family, sensor kinase. (420 aa)
	SEP64739.1	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (368 aa)
	SEP86490.1	Diguanylate cyclase/phosphodiesterase. (868 aa)
	SEP65182.1	DNA-binding transcriptional regulator, IclR family. (210 aa)
	SEQ31036.1	DNA-binding transcriptional regulator, IclR family. (178 aa)
	SEQ43724.1	Transcriptional regulator, IclR family. (248 aa)
	hrcA	Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (340 aa)
	SEQ70992.1	Transcriptional regulator, IclR family. (262 aa)
	SEQ82002.1	GAF domain-containing protein. (403 aa)
	SEQ89162.1	PucR C-terminal helix-turn-helix domain-containing protein. (596 aa)
	SEQ89348.1	Transcriptional regulator, IclR family. (267 aa)
	SEQ91123.1	Response regulator receiver and ANTAR domain protein. (259 aa)
	SEQ91105.1	Anti-anti-sigma factor. (869 aa)

Your Current Organism:

Lechevalieria xinjiangensis

NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEP64739.1	SEQ82002.1	SAMN05216188_10164	SAMN05216188_105220	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	GAF domain-containing protein.	0.643
SEP64739.1	SEQ87382.1	SAMN05216188_10164	SAMN05216188_10634	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	GAF domain-containing protein.	0.540
SEP64739.1	SEQ91105.1	SAMN05216188_10164	SAMN05216188_106178	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Anti-anti-sigma factor.	0.902
SEP64739.1	SEQ92032.1	SAMN05216188_10164	SAMN05216188_106217	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	PAS/PAC sensor hybrid histidine kinase.	0.974
SEP64739.1	SER00709.1	SAMN05216188_10164	SAMN05216188_10751	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Signal transduction histidine kinase.	0.400
SEP64739.1	SER50252.1	SAMN05216188_10164	SAMN05216188_11227	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	GAF domain-containing protein.	0.418
SEP64739.1	SER60109.1	SAMN05216188_10164	SAMN05216188_11352	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Signal transduction histidine kinase.	0.974
SEP64739.1	SER60875.1	SAMN05216188_10164	SAMN05216188_11384	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	GAF modulated transcriptional regulator, LuxR family.	0.491
SEP64739.1	SER62094.1	SAMN05216188_10164	SAMN05216188_113123	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Signal transduction histidine kinase.	0.407
SEP64739.1	SES00156.1	SAMN05216188_10164	SAMN05216188_11946	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Hypothetical protein.	0.954
SEP65182.1	SEQ31036.1	SAMN05216188_10177	SAMN05216188_102726	DNA-binding transcriptional regulator, IclR family.	DNA-binding transcriptional regulator, IclR family.	0.662
SEP65182.1	SEQ70992.1	SAMN05216188_10177	SAMN05216188_104397	DNA-binding transcriptional regulator, IclR family.	Transcriptional regulator, IclR family.	0.664
SEP65182.1	SEQ89348.1	SAMN05216188_10177	SAMN05216188_106113	DNA-binding transcriptional regulator, IclR family.	Transcriptional regulator, IclR family.	0.536
SEP65182.1	SER26809.1	SAMN05216188_10177	SAMN05216188_109230	DNA-binding transcriptional regulator, IclR family.	Transcriptional regulator, IclR family.	0.589
SEP65182.1	SER53431.1	SAMN05216188_10177	SAMN05216188_112152	DNA-binding transcriptional regulator, IclR family.	Transcriptional regulator, IclR family.	0.586
SEP65182.1	SER69724.1	SAMN05216188_10177	SAMN05216188_11457	DNA-binding transcriptional regulator, IclR family.	Transcriptional regulator, IclR family.	0.608
SEP65182.1	SES22673.1	SAMN05216188_10177	SAMN05216188_12711	DNA-binding transcriptional regulator, IclR family.	Transcriptional regulator, IclR family.	0.601
SEP65182.1	SES25095.1	SAMN05216188_10177	SAMN05216188_12813	DNA-binding transcriptional regulator, IclR family.	Transcriptional regulator, IclR family.	0.622
SEP65182.1	SES30431.1	SAMN05216188_10177	SAMN05216188_13176	DNA-binding transcriptional regulator, IclR family.	Transcriptional regulator, IclR family.	0.696
SEP65182.1	SES32299.1	SAMN05216188_10177	SAMN05216188_1334	DNA-binding transcriptional regulator, IclR family.	Transcriptional regulator, IclR family.	0.682