STRINGSTRING
Rpic_3451 Rpic_3451 Rpic_3454 Rpic_3454 Rpic_3455 Rpic_3455 Rpic_3456 Rpic_3456 Rpic_3457 Rpic_3457
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rpic_3451PFAM: 5'-Nucleotidase domain protein; KEGG: rso:RSc3253 probable sulfur oxidation signal peptide protein; Belongs to the 5'-nucleotidase family. (573 aa)
Rpic_3454KEGG: rso:RSc3256 hypothetical protein. (273 aa)
Rpic_3455PFAM: Domain of unknown function DUF1791; KEGG: rso:RSc3257 hypothetical signal peptide protein. (151 aa)
Rpic_3456PFAM: Sulphur oxidation protein SoxZ; KEGG: rso:RSc3258 hypothetical protein. (103 aa)
Rpic_3457KEGG: rso:RSc3259 hypothetical protein. (156 aa)
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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