STRINGSTRING
Rpic_1645 Rpic_1645 Rpic_1646 Rpic_1646 Rpic_1647 Rpic_1647 Rpic_1648 Rpic_1648 Rpic_1807 Rpic_1807 Rpic_1808 Rpic_1808 Rpic_1809 Rpic_1809 Rpic_1810 Rpic_1810
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rpic_1645KEGG: rso:RS05404 hypothetical signal peptide protein. (112 aa)
Rpic_1646TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rso:RS05405 probable cation efflux system transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1055 aa)
Rpic_1647TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: reh:H16_A2186 cobalt-zinc-cadmium resistance membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (516 aa)
Rpic_1648KEGG: rme:Rmet_6134 outer membrane efflux protein. (434 aa)
Rpic_1807KEGG: reh:H16_A2185 cobalt-zinc-cadmium resistance outer membrane porin. (433 aa)
Rpic_1808TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: reh:H16_A2186 cobalt-zinc-cadmium resistance membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (510 aa)
Rpic_1809TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rso:RS05405 probable cation efflux system transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1056 aa)
Rpic_1810KEGG: reh:H16_A2188 hypothetical periplasmic protein. (112 aa)
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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