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Rpic_4223 Rpic_4223 Rpic_4374 Rpic_4374 Rpic_4422 Rpic_4422 Rpic_4545 Rpic_4545 Rpic_4684 Rpic_4684 Rpic_4719 Rpic_4719 Rpic_4898 Rpic_4898 Rpic_0058 Rpic_0058 Rpic_0540 Rpic_0540 Rpic_0645 Rpic_0645 Rpic_1124 Rpic_1124 Rpic_1648 Rpic_1648 Rpic_1670 Rpic_1670 Rpic_1764 Rpic_1764 Rpic_1807 Rpic_1807 Rpic_2859 Rpic_2859 Rpic_2946 Rpic_2946 Rpic_3044 Rpic_3044 Rpic_3459 Rpic_3459 Rpic_3747 Rpic_3747 Rpic_3776 Rpic_3776 Rpic_3911 Rpic_3911 Rpic_4181 Rpic_4181 Rpic_4285 Rpic_4285
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rpic_4223TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS05506 putative outer-membrane drug efflux protein. (510 aa)
Rpic_4374KEGG: reu:Reut_B5656 hypothetical protein. (418 aa)
Rpic_4422TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_A1225 RND efflux system, outer membrane lipoprotein, NodT. (491 aa)
Rpic_4545TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS01780 probable outer membrane channel lipoprotein. (525 aa)
Rpic_4684PFAM: outer membrane efflux protein; KEGG: rso:RS00407 putative outer membrane cation efflux system protein. (448 aa)
Rpic_4719KEGG: rso:RS00868 probable transmembrane protein. (341 aa)
Rpic_4898TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS02156 putative outer membrane drug efflux lipoprotein. (484 aa)
Rpic_0058TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RSc0166 probable outer membrane channel lipoprotein. (579 aa)
Rpic_0540PFAM: protein of unknown function UPF0118; KEGG: bch:Bcen2424_3807 protein of unknown function UPF0118. (349 aa)
Rpic_0645TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rso:RSc0695 probable porin (OMP) ABC transporter protein. (488 aa)
Rpic_1124TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RSc1294 putative outer membrane channel lipoprotein. (509 aa)
Rpic_1648KEGG: rme:Rmet_6134 outer membrane efflux protein. (434 aa)
Rpic_1670TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5321 RND efflux system, outer membrane lipoprotein, NodT. (505 aa)
Rpic_1764PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5982 outer membrane efflux protein. (418 aa)
Rpic_1807KEGG: reh:H16_A2185 cobalt-zinc-cadmium resistance outer membrane porin. (433 aa)
Rpic_2859PFAM: protein of unknown function UPF0118; KEGG: rso:RSc2624 probable permease transmembrane transport protein. (356 aa)
Rpic_2946TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5321 RND efflux system, outer membrane lipoprotein, NodT. (505 aa)
Rpic_3044PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc2802 probable transmembrane protein. (285 aa)
Rpic_3459PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc3261 hypothetical protein. (295 aa)
Rpic_3747TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RSc0009 probable drug efflux lipoprotein. (514 aa)
Rpic_3776PFAM: protein of unknown function UPF0118; KEGG: aav:Aave_2002 protein of unknown function UPF0118. (439 aa)
Rpic_3911PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_3978 outer membrane efflux protein. (470 aa)
Rpic_4181TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS03144 putative outer membrane channel lipoprotein transmembrane. (501 aa)
Rpic_4285PFAM: outer membrane efflux protein; KEGG: pnu:Pnuc_1302 outer membrane efflux protein. (456 aa)
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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