STRINGSTRING
Rpic_4356 Rpic_4356 Rpic_4359 Rpic_4359 Rpic_4358 Rpic_4358 Rpic_2148 Rpic_2148 Rpic_2149 Rpic_2149 Rpic_2151 Rpic_2151 Rpic_2513 Rpic_2513 Rpic_4093 Rpic_4093
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rpic_4356TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rso:RSc1996 putative transmembrane succinate dehydrogenase (cytochrome b-556 subunit) oxidoreductase protein. (158 aa)
Rpic_4359KEGG: rso:RSc1993 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin. (233 aa)
Rpic_4358KEGG: rso:RSc1994 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (592 aa)
Rpic_2148KEGG: rso:RSc1993 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (233 aa)
Rpic_2149KEGG: rso:RSc1994 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (592 aa)
Rpic_2151TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rso:RSc1996 putative transmembrane succinate dehydrogenase (cytochrome b-556 subunit) oxidoreductase protein. (136 aa)
Rpic_2513TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: bte:BTH_II0362 succinate dehydrogenase, iron-sulfur protein. (235 aa)
Rpic_4093PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reh:H16_B2242 putative oxidoreductase. (574 aa)
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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