STRINGSTRING
Rpic_4051 Rpic_4051 Rpic_1674 Rpic_1674 Rpic_2095 Rpic_2095 Rpic_4834 Rpic_4834
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rpic_4051PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: reu:Reut_B5602 histidine kinase, HAMP region:bacterial chemotaxis sensory transducer. (634 aa)
Rpic_1674Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rme:Rmet_5322 periplasmic sensor signal transduction histidine kinase. (535 aa)
Rpic_2095PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A4301 methyl-accepting chemotaxis sensory transducer. (520 aa)
Rpic_4834Putative CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: PAC repeat-containing protein; KEGG: bxe:Bxe_B3011 CheA signal transduction histidine kinases (STHK). (794 aa)
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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