STRINGSTRING
Rpic_0670 Rpic_0670 Rpic_0477 Rpic_0477 Rpic_0478 Rpic_0478 Rpic_0480 Rpic_0480 Rpic_0665 Rpic_0665 Rpic_0666 Rpic_0666 Rpic_0672 Rpic_0672 Rpic_0676 Rpic_0676 Rpic_2913 Rpic_2913 Rpic_2914 Rpic_2914 Rpic_2915 Rpic_2915 Rpic_2916 Rpic_2916 Rpic_3391 Rpic_3391 Rpic_3392 Rpic_3392 Rpic_3393 Rpic_3393 Rpic_3394 Rpic_3394
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rpic_0670Tfp pilus assembly protein FimT-like protein; KEGG: xft:PD1615 hypothetical protein. (214 aa)
Rpic_0477KEGG: rso:RSc0557 probable type 4 fimbrial pilin signal peptide protein; Belongs to the N-Me-Phe pilin family. (173 aa)
Rpic_0478KEGG: rso:RSc0558 type 4 fimbrial pilin signal peptide protein; Belongs to the N-Me-Phe pilin family. (169 aa)
Rpic_0480Pilin subfamily protein; KEGG: bte:BTH_I0649 pilin (bacterial filament) subfamily; Belongs to the N-Me-Phe pilin family. (174 aa)
Rpic_0665KEGG: rso:RSc0716 putative type 4 fimbrial pilin related transmembrane protein. (190 aa)
Rpic_0666KEGG: rso:RSc0717 putative type-4 frimbrial pilin-related signal peptide protein. (134 aa)
Rpic_0672KEGG: noc:Noc_2272 type IV pilus assembly protein PilW. (344 aa)
Rpic_0676KEGG: xoo:XOO3195 type IV pilin. (144 aa)
Rpic_2913KEGG: rso:RSc2677 putative type 4 fimbrial biogenesis PilW-related protein transmembrane. (345 aa)
Rpic_2914KEGG: rso:RSc2678 probable type 4 fimbrial biogenesis related transmembrane protein. (198 aa)
Rpic_2915KEGG: rso:RSc2679 putative type 4 fimbrial pilin related transmembrane protein. (157 aa)
Rpic_2916KEGG: rso:RSc2680 probable type 4 fimbrial biogenesis transmembrane protein. (145 aa)
Rpic_3391TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rso:RSc3106 putative general secretion pathway G transmembrane protein. (156 aa)
Rpic_3392TIGRFAM: general secretion pathway protein H; KEGG: rso:RSc3107 probable general secretory pathway H transmembrane protein. (164 aa)
Rpic_3393TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: rso:RSc3108 probable general secretory pathway I transmembrane protein. (132 aa)
Rpic_3394KEGG: rso:RSc3109 probable general secretory pathway J transmembrane protein. (247 aa)
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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