(19 nodes) Cytosolic large ribosomal subunit network (Penicillium italicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PITC_072220	Ribosomal protein L28e. (151 aa)
	PITC_013710	Ribosomal protein L6, conserved site-2. (192 aa)
	PITC_053820	Ribosomal protein L24e-like protein. (158 aa)
	PITC_065350	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (242 aa)
	PITC_076990	Ribosomal protein L30e. (106 aa)
	PITC_000210	Ribosomal protein L14. (215 aa)
	PITC_028350	Ribosomal protein L22e. (124 aa)
	PITC_026210	Ribosomal protein L34Ae. (135 aa)
	PITC_061490	Translation protein SH3-like, subgroup. (197 aa)
	PITC_072700	Oxidoreductase, N-terminal. (507 aa)
	PITC_001730	Translation elongation/initiation factor/Ribosomal, beta-barrel. (109 aa)
	PITC_081120	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
	PITC_085990	Ribosomal protein L7A/L8. (265 aa)
	PITC_005040	Ribosomal protein 60S; Belongs to the eukaryotic ribosomal protein P1/P2 family. (108 aa)
	PITC_016250	Translation elongation/initiation factor/Ribosomal, beta-barrel; Belongs to the universal ribosomal protein uL3 family. (1269 aa)
	PITC_089340	Ribosomal protein 60S; Belongs to the eukaryotic ribosomal protein P1/P2 family. (107 aa)
	PITC_010500	Ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family. (79 aa)
	PITC_010380	Ribosomal protein L5; Belongs to the universal ribosomal protein uL5 family. (175 aa)
	PITC_006280	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (1080 aa)

Your Current Organism:

Penicillium italicum

NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PITC_000210	PITC_001730	A0A0A2KRP5	A0A0A2L5S1	Ribosomal protein L14.	Translation elongation/initiation factor/Ribosomal, beta-barrel.	0.999
PITC_000210	PITC_005040	A0A0A2KRP5	A0A0A2L9T9	Ribosomal protein L14.	Ribosomal protein 60S; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.998
PITC_000210	PITC_006280	A0A0A2KRP5	A0A0A2LHP6	Ribosomal protein L14.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999
PITC_000210	PITC_010380	A0A0A2KRP5	A0A0A2LEZ8	Ribosomal protein L14.	Ribosomal protein L5; Belongs to the universal ribosomal protein uL5 family.	0.999
PITC_000210	PITC_010500	A0A0A2KRP5	A0A0A2LEZ1	Ribosomal protein L14.	Ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
PITC_000210	PITC_013710	A0A0A2KRP5	A0A0A2KBA5	Ribosomal protein L14.	Ribosomal protein L6, conserved site-2.	0.999
PITC_000210	PITC_016250	A0A0A2KRP5	A0A0A2LB88	Ribosomal protein L14.	Translation elongation/initiation factor/Ribosomal, beta-barrel; Belongs to the universal ribosomal protein uL3 family.	0.999
PITC_000210	PITC_026210	A0A0A2KRP5	A0A0A2KYC0	Ribosomal protein L14.	Ribosomal protein L34Ae.	0.999
PITC_000210	PITC_028350	A0A0A2KRP5	A0A0A2KVH9	Ribosomal protein L14.	Ribosomal protein L22e.	0.999
PITC_000210	PITC_053820	A0A0A2KRP5	A0A0A2KK09	Ribosomal protein L14.	Ribosomal protein L24e-like protein.	0.999
PITC_000210	PITC_061490	A0A0A2KRP5	A0A0A2L193	Ribosomal protein L14.	Translation protein SH3-like, subgroup.	0.999
PITC_000210	PITC_065350	A0A0A2KRP5	A0A0A2KKR3	Ribosomal protein L14.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
PITC_000210	PITC_072220	A0A0A2KRP5	A0A0A2K776	Ribosomal protein L14.	Ribosomal protein L28e.	0.999
PITC_000210	PITC_072700	A0A0A2KRP5	A0A0A2L528	Ribosomal protein L14.	Oxidoreductase, N-terminal.	0.999
PITC_000210	PITC_076990	A0A0A2KRP5	A0A0A2KLW2	Ribosomal protein L14.	Ribosomal protein L30e.	0.999
PITC_000210	PITC_081120	A0A0A2KRP5	A0A0A2L8B2	Ribosomal protein L14.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
PITC_000210	PITC_085990	A0A0A2KRP5	A0A0A2L9L1	Ribosomal protein L14.	Ribosomal protein L7A/L8.	0.999
PITC_000210	PITC_089340	A0A0A2KRP5	A0A0A2LC88	Ribosomal protein L14.	Ribosomal protein 60S; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.998
PITC_001730	PITC_000210	A0A0A2L5S1	A0A0A2KRP5	Translation elongation/initiation factor/Ribosomal, beta-barrel.	Ribosomal protein L14.	0.999
PITC_001730	PITC_005040	A0A0A2L5S1	A0A0A2L9T9	Translation elongation/initiation factor/Ribosomal, beta-barrel.	Ribosomal protein 60S; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.998