(6 nodes) Cytosolic large ribosomal subunit network (Penicillium italicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PITC_052320	Nucleic acid-binding, OB-fold. (254 aa)
	PITC_020080	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (179 aa)
	PITC_066140	Ribosomal protein L30, N-terminal. (264 aa)
	PITC_026470	Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	PITC_001380	Ribosomal protein L37; Binds to the 23S rRNA. (92 aa)
	PITC_089200	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)

Your Current Organism:

Penicillium italicum

NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PITC_001380	PITC_020080	A0A0A2L5N0	A0A0A2KH01	Ribosomal protein L37; Binds to the 23S rRNA.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
PITC_001380	PITC_026470	A0A0A2L5N0	A0A0A2KVR8	Ribosomal protein L37; Binds to the 23S rRNA.	Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.	0.999
PITC_001380	PITC_052320	A0A0A2L5N0	A0A0A2KDX9	Ribosomal protein L37; Binds to the 23S rRNA.	Nucleic acid-binding, OB-fold.	0.999
PITC_001380	PITC_066140	A0A0A2L5N0	A0A0A2KVI5	Ribosomal protein L37; Binds to the 23S rRNA.	Ribosomal protein L30, N-terminal.	0.999
PITC_001380	PITC_089200	A0A0A2L5N0	A0A0A2L9M6	Ribosomal protein L37; Binds to the 23S rRNA.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
PITC_020080	PITC_001380	A0A0A2KH01	A0A0A2L5N0	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
PITC_020080	PITC_026470	A0A0A2KH01	A0A0A2KVR8	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.	0.999
PITC_020080	PITC_052320	A0A0A2KH01	A0A0A2KDX9	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Nucleic acid-binding, OB-fold.	0.999
PITC_020080	PITC_066140	A0A0A2KH01	A0A0A2KVI5	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	Ribosomal protein L30, N-terminal.	0.999
PITC_020080	PITC_089200	A0A0A2KH01	A0A0A2L9M6	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
PITC_026470	PITC_001380	A0A0A2KVR8	A0A0A2L5N0	Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
PITC_026470	PITC_020080	A0A0A2KVR8	A0A0A2KH01	Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
PITC_026470	PITC_052320	A0A0A2KVR8	A0A0A2KDX9	Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.	Nucleic acid-binding, OB-fold.	0.999
PITC_026470	PITC_066140	A0A0A2KVR8	A0A0A2KVI5	Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.	Ribosomal protein L30, N-terminal.	0.999
PITC_026470	PITC_089200	A0A0A2KVR8	A0A0A2L9M6	Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
PITC_052320	PITC_001380	A0A0A2KDX9	A0A0A2L5N0	Nucleic acid-binding, OB-fold.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
PITC_052320	PITC_020080	A0A0A2KDX9	A0A0A2KH01	Nucleic acid-binding, OB-fold.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
PITC_052320	PITC_026470	A0A0A2KDX9	A0A0A2KVR8	Nucleic acid-binding, OB-fold.	Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.	0.999
PITC_052320	PITC_066140	A0A0A2KDX9	A0A0A2KVI5	Nucleic acid-binding, OB-fold.	Ribosomal protein L30, N-terminal.	0.999
PITC_052320	PITC_089200	A0A0A2KDX9	A0A0A2L9M6	Nucleic acid-binding, OB-fold.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999