Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJE39003.1 | AJE39004.1 | SNOD_02260 | SNOD_02265 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.983 |
| AJE39003.1 | AJE39005.1 | SNOD_02260 | SNOD_02270 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.816 |
| AJE39003.1 | AJE39121.1 | SNOD_02260 | SNOD_03020 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
| AJE39003.1 | AJE39122.1 | SNOD_02260 | SNOD_03025 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.850 |
| AJE39003.1 | AJE39123.1 | SNOD_02260 | SNOD_03035 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.578 |
| AJE39003.1 | AJE40089.1 | SNOD_02260 | SNOD_08635 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| AJE39003.1 | AJE40090.1 | SNOD_02260 | SNOD_08640 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.540 |
| AJE39003.1 | AJE40091.1 | SNOD_02260 | SNOD_08645 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.873 |
| AJE39003.1 | AJE40179.1 | SNOD_02260 | SNOD_09145 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.846 |
| AJE39003.1 | AJE40180.1 | SNOD_02260 | SNOD_09150 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.470 |
| AJE39003.1 | AJE40181.1 | SNOD_02260 | SNOD_09155 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.929 |
| AJE39003.1 | AJE41566.1 | SNOD_02260 | SNOD_17190 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.623 |
| AJE39003.1 | AJE41567.1 | SNOD_02260 | SNOD_17195 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.567 |
| AJE39003.1 | AJE41568.1 | SNOD_02260 | SNOD_17200 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.563 |
| AJE39003.1 | AJE41569.1 | SNOD_02260 | SNOD_17205 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.917 |
| AJE39003.1 | AJE42470.1 | SNOD_02260 | SNOD_22345 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.927 |
| AJE39003.1 | AJE42471.1 | SNOD_02260 | SNOD_22350 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.580 |
| AJE39003.1 | AJE42472.1 | SNOD_02260 | SNOD_22355 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | atrA protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.858 |
| AJE39003.1 | AJE42865.1 | SNOD_02260 | SNOD_24575 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.544 |
| AJE39003.1 | AJE42866.1 | SNOD_02260 | SNOD_24580 | Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.528 |
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