Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJE38809.1 | AJE39382.1 | SNOD_01005 | SNOD_04545 | Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.722 |
| AJE38809.1 | AJE40206.1 | SNOD_01005 | SNOD_09305 | Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.822 |
| AJE38809.1 | AJE41418.1 | SNOD_01005 | SNOD_16305 | Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.822 |
| AJE38809.1 | AJE42384.1 | SNOD_01005 | SNOD_21840 | Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.722 |
| AJE38809.1 | AJE43056.1 | SNOD_01005 | SNOD_25745 | Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.914 |
| AJE38809.1 | AJE43213.1 | SNOD_01005 | SNOD_26690 | Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.905 |
| AJE38809.1 | rph | SNOD_01005 | SNOD_13100 | Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.699 |
| AJE39382.1 | AJE38809.1 | SNOD_04545 | SNOD_01005 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. | 0.722 |
| AJE39382.1 | AJE40206.1 | SNOD_04545 | SNOD_09305 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.938 |
| AJE39382.1 | AJE40661.1 | SNOD_04545 | SNOD_11790 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.867 |
| AJE39382.1 | AJE41418.1 | SNOD_04545 | SNOD_16305 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.929 |
| AJE39382.1 | AJE41676.1 | SNOD_04545 | SNOD_17840 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.870 |
| AJE39382.1 | AJE43056.1 | SNOD_04545 | SNOD_25745 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.852 |
| AJE39382.1 | AJE43142.1 | SNOD_04545 | SNOD_26260 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. | 0.722 |
| AJE39382.1 | pnp | SNOD_04545 | SNOD_24385 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.959 |
| AJE39382.1 | rph | SNOD_04545 | SNOD_13100 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.834 |
| AJE40206.1 | AJE38809.1 | SNOD_09305 | SNOD_01005 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. | 0.822 |
| AJE40206.1 | AJE39382.1 | SNOD_09305 | SNOD_04545 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.938 |
| AJE40206.1 | AJE41541.1 | SNOD_09305 | SNOD_17060 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.413 |
| AJE40206.1 | AJE41676.1 | SNOD_09305 | SNOD_17840 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.955 |
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