Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJE39308.1 | AJE39786.1 | SNOD_04135 | SNOD_06975 | RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.632 |
| AJE39308.1 | AJE41345.1 | SNOD_04135 | SNOD_15860 | RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.956 |
| AJE39440.1 | AJE39441.1 | SNOD_04930 | SNOD_04935 | Peptidase C60; Derived by automated computational analysis using gene prediction method: Protein Homology. | Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.611 |
| AJE39440.1 | AJE41582.1 | SNOD_04930 | SNOD_17285 | Peptidase C60; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.440 |
| AJE39441.1 | AJE39440.1 | SNOD_04935 | SNOD_04930 | Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase C60; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.611 |
| AJE39729.1 | AJE39774.1 | SNOD_06635 | SNOD_06880 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sporulation protein SsgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
| AJE39729.1 | AJE40054.1 | SNOD_06635 | SNOD_08435 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.630 |
| AJE39729.1 | AJE41345.1 | SNOD_06635 | SNOD_15860 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.733 |
| AJE39729.1 | AJE41446.1 | SNOD_06635 | SNOD_16505 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
| AJE39729.1 | AJE41450.1 | SNOD_06635 | SNOD_16530 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | 0.555 |
| AJE39729.1 | AJE41451.1 | SNOD_06635 | SNOD_16535 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | 0.494 |
| AJE39729.1 | AJE41514.1 | SNOD_06635 | SNOD_16920 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.853 |
| AJE39729.1 | AJE41728.1 | SNOD_06635 | SNOD_18145 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.624 |
| AJE39729.1 | AJE42742.1 | SNOD_06635 | SNOD_23880 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.794 |
| AJE39729.1 | AJE43528.1 | SNOD_06635 | SNOD_28535 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.747 |
| AJE39773.1 | AJE39774.1 | SNOD_06865 | SNOD_06880 | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sporulation protein SsgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| AJE39774.1 | AJE39729.1 | SNOD_06880 | SNOD_06635 | Sporulation protein SsgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
| AJE39774.1 | AJE39773.1 | SNOD_06880 | SNOD_06865 | Sporulation protein SsgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.576 |
| AJE39774.1 | AJE39775.1 | SNOD_06880 | SNOD_06885 | Sporulation protein SsgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.736 |
| AJE39774.1 | AJE40054.1 | SNOD_06880 | SNOD_08435 | Sporulation protein SsgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.684 |
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