40 items (Streptomyces nodosus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJE38942.1	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
	AJE39207.1	Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	AJE39237.1	SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
	AJE39239.1	Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	AJE39240.1	Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
	AJE39263.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (789 aa)
	AJE39268.1	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
	AJE39496.1	Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology. (747 aa)
	AJE39657.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family. (790 aa)
	AJE40105.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (78 aa)
	AJE40108.1	Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
	AJE40444.1	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
	AJE40549.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (818 aa)
	AJE40758.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
	AJE40759.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
	AJE40819.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
	AJE40842.1	Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6. (335 aa)
	AJE41211.1	Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
	AJE42059.1	Endo-1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
	AJE42246.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (675 aa)
	AJE42257.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
	AJE42671.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (1008 aa)
	AJE42792.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (237 aa)
	AJE42988.1	Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (379 aa)
	AJE42989.1	Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
	AJE43153.1	SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	AJE43210.1	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	AJE43211.1	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (344 aa)
	AJE43290.1	Xyloglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (902 aa)
	AJE43291.1	Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (971 aa)
	AJE43292.1	Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
	AJE43293.1	Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6. (582 aa)
	AJE43463.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
	AJE43735.1	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa)
	AJE43859.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
	AJE44017.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
	AJE44075.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
	AJE44080.1	Cellobiohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6. (462 aa)
	AJE44102.1	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (509 aa)
	AJE44279.1	Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)

Your Current Organism:

Streptomyces nodosus

NCBI taxonomy Id: 40318
Other names: ATCC 14899, ATCC 23942, BCRC 13768, CBS 926.68, CCRC 13768, CCRC:13768, DSM 40109, IFO 12895, ISP 5109, JCM 4297, JCM 4656, KCTC 9035, LMG 19340, LMG:19340, NBRC 12895, NCIMB 12816, NRRL B-2371, NRRL-ISP 5109, RIA 831, S. nodosus

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJE38942.1	AJE39207.1	SNOD_01880	SNOD_03560	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
AJE38942.1	AJE39237.1	SNOD_01880	SNOD_03750	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
AJE38942.1	AJE39496.1	SNOD_01880	SNOD_05270	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
AJE38942.1	AJE40105.1	SNOD_01880	SNOD_08720	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.433
AJE38942.1	AJE40108.1	SNOD_01880	SNOD_08740	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
AJE38942.1	AJE41211.1	SNOD_01880	SNOD_15095	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.812
AJE38942.1	AJE42059.1	SNOD_01880	SNOD_19995	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endo-1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
AJE38942.1	AJE42246.1	SNOD_01880	SNOD_21055	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
AJE38942.1	AJE42257.1	SNOD_01880	SNOD_21115	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
AJE38942.1	AJE42792.1	SNOD_01880	SNOD_24165	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 12 (cellulase H) family.	0.564
AJE38942.1	AJE42988.1	SNOD_01880	SNOD_25355	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 12 (cellulase H) family.	0.468
AJE38942.1	AJE42989.1	SNOD_01880	SNOD_25360	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.590
AJE38942.1	AJE43153.1	SNOD_01880	SNOD_26315	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
AJE38942.1	AJE43290.1	SNOD_01880	SNOD_27125	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xyloglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.766
AJE38942.1	AJE43291.1	SNOD_01880	SNOD_27130	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
AJE38942.1	AJE43292.1	SNOD_01880	SNOD_27135	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
AJE38942.1	AJE43293.1	SNOD_01880	SNOD_27140	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.	0.694
AJE38942.1	AJE44080.1	SNOD_01880	SNOD_31855	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cellobiohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.	0.535
AJE38942.1	AJE44279.1	SNOD_01880	SNOD_33065	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.596
AJE39207.1	AJE38942.1	SNOD_03560	SNOD_01880	Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487

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