Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJE38942.1 | AJE39237.1 | SNOD_01880 | SNOD_03750 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
| AJE38942.1 | AJE39496.1 | SNOD_01880 | SNOD_05270 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.648 |
| AJE38942.1 | AJE40105.1 | SNOD_01880 | SNOD_08720 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
| AJE38942.1 | AJE40108.1 | SNOD_01880 | SNOD_08740 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
| AJE38942.1 | AJE42059.1 | SNOD_01880 | SNOD_19995 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endo-1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.759 |
| AJE38942.1 | AJE42792.1 | SNOD_01880 | SNOD_24165 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 12 (cellulase H) family. | 0.564 |
| AJE38942.1 | AJE42988.1 | SNOD_01880 | SNOD_25355 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 12 (cellulase H) family. | 0.468 |
| AJE38942.1 | AJE42989.1 | SNOD_01880 | SNOD_25360 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.590 |
| AJE38942.1 | AJE43290.1 | SNOD_01880 | SNOD_27125 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xyloglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.766 |
| AJE38942.1 | AJE43291.1 | SNOD_01880 | SNOD_27130 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.843 |
| AJE38942.1 | AJE43292.1 | SNOD_01880 | SNOD_27135 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.544 |
| AJE38942.1 | AJE43293.1 | SNOD_01880 | SNOD_27140 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6. | 0.694 |
| AJE38942.1 | AJE44080.1 | SNOD_01880 | SNOD_31855 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cellobiohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6. | 0.535 |
| AJE38942.1 | AJE44279.1 | SNOD_01880 | SNOD_33065 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.596 |
| AJE39237.1 | AJE38942.1 | SNOD_03750 | SNOD_01880 | SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
| AJE39237.1 | AJE39239.1 | SNOD_03750 | SNOD_03765 | SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.715 |
| AJE39237.1 | AJE39240.1 | SNOD_03750 | SNOD_03770 | SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.780 |
| AJE39237.1 | AJE39268.1 | SNOD_03750 | SNOD_03915 | SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
| AJE39237.1 | AJE39496.1 | SNOD_03750 | SNOD_05270 | SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.492 |
| AJE39237.1 | AJE40108.1 | SNOD_03750 | SNOD_08740 | SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.489 |
page 1 of 24