STRINGSTRING
AJE39907.1 AJE39907.1 AJE44196.1 AJE44196.1 AJE44075.1 AJE44075.1 AJE43239.1 AJE43239.1 AJE41337.1 AJE41337.1 AJE40843.1 AJE40843.1 AJE40824.1 AJE40824.1 AJE40759.1 AJE40759.1 AJE40758.1 AJE40758.1 AJE40752.1 AJE40752.1 AJE40621.1 AJE40621.1 AJE40571.1 AJE40571.1 AJE40435.1 AJE40435.1 AJE39906.1 AJE39906.1 AJE39440.1 AJE39440.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJE39907.1Chaplin; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
AJE44196.1Peptidase C60; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
AJE44075.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
AJE43239.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. (802 aa)
AJE41337.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
AJE40843.1Sortase; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
AJE40824.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
AJE40759.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
AJE40758.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
AJE40752.1Chaplin; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)
AJE40621.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
AJE40571.1Peptidase C60; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
AJE40435.1Peptidase C60 sortase A and B; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
AJE39906.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
AJE39440.1Peptidase C60; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
Your Current Organism:
Streptomyces nodosus
NCBI taxonomy Id: 40318
Other names: ATCC 14899, ATCC 23942, BCRC 13768, CBS 926.68, CCRC 13768, CCRC:13768, DSM 40109, IFO 12895, ISP 5109, JCM 4297, JCM 4656, KCTC 9035, LMG 19340, LMG:19340, NBRC 12895, NCIMB 12816, NRRL B-2371, NRRL-ISP 5109, RIA 831, S. nodosus
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