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| | AJE44515.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa) |
| | argS | arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (586 aa) |
| | trmD | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (277 aa) |
| | lysS | lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (579 aa) |
| | AJE41880.1 | Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa) |
| | AJE41935.1 | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (647 aa) |
| | rpoB | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1161 aa) |
| | rpoC | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1306 aa) |
| | rpoA-2 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (340 aa) |
| | AJE42061.1 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa) |
| | AJE42098.1 | ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. (859 aa) |
| | radA | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (469 aa) |
| | AJE41839.1 | Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa) |
| | AJE41811.1 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (621 aa) |
| | AJE41777.1 | 3'-5' exonuclease; Similar to DNA polymerase I; lacks 5'-3' exonuclease domain; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa) |
| | AJE41775.1 | rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa) |
| | AJE41773.1 | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (943 aa) |
| | AJE41755.1 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa) |
| | nth | Endonuclease; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (375 aa) |
| | AJE41736.1 | Hypothetical protein; Required for the transposition of the insertion element. (105 aa) |
| | AJE41671.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa) |
| | AJE41657.1 | Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa) |
| | metG | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (571 aa) |
| | aspS | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. (587 aa) |
| | AJE41595.1 | rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa) |
| | gyrA | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (865 aa) |
| | gyrB | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (695 aa) |
| | AJE41558.1 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (376 aa) |
| | rsmG | 16S rRNA methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. (238 aa) |
| | AJE41528.1 | Helicase DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (491 aa) |
| | kptA | RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (186 aa) |
| | serS | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (425 aa) |
| | AJE41472.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa) |
| | AJE41471.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa) |
| | AJE41435.1 | Daunorubicin resistance protein DrrC; Derived by automated computational analysis using gene prediction method: Protein Homology. (800 aa) |
| | AJE41420.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (68 aa) |
| | AJE41418.1 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1325 aa) |
| | trmB | tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (284 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (141 aa) |
| | AJE41339.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa) |
| | cysS | cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (466 aa) |
| | AJE41310.1 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (313 aa) |
| | AJE41241.1 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (680 aa) |
| | AJE41239.1 | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa) |
| | AJE41238.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (855 aa) |
| | AJE41217.1 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. (196 aa) |
| | AJE41179.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa) |
| | rpoA | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (338 aa) |
| | AJE41117.1 | Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa) |
| | AJE41104.1 | YbaK/prolyl-tRNA synthetase associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa) |
| | pth | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. (201 aa) |
| | mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1179 aa) |
| | AJE40995.1 | 3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa) |
| | AJE40966.1 | Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa) |
| | AJE40941.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa) |
| | AJE40923.1 | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (769 aa) |
| | rph | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (243 aa) |
| | AJE40830.1 | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa) |
| | AJE40827.1 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa) |
| | orn | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. (200 aa) |
| | recD2 | Helicase; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. (759 aa) |
| | AJE40692.1 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (269 aa) |
| | valS | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (874 aa) |
| | AJE42742.1 | RNA polymerase sigma70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (258 aa) |
| | AJE40667.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa) |
| | AJE40661.1 | Derived by automated computational analysis using gene prediction method: Protein Homology. (1308 aa) |
| | leuS | leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (972 aa) |
| | rnz | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (309 aa) |
| | ybeY | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (165 aa) |
| | glyQS | glycyl-tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (460 aa) |
| | AJE40575.1 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (383 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (634 aa) |
| | AJE40460.1 | Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa) |
| | AJE40452.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa) |
| | AJE40404.1 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa) |
| | AJE40388.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa) |
| | AJE40363.1 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (597 aa) |
| | nfo | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (274 aa) |
| | rsmH | 16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (309 aa) |
| | ileS | isoleucyl-tRNA synthase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1037 aa) |
| | AJE40272.1 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (314 aa) |
| | AJE40264.1 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (1179 aa) |
| | AJE40263.1 | NYN domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa) |
| | AJE40259.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (166 aa) |
| | polA | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (907 aa) |
| | AJE40206.1 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (847 aa) |
| | AJE40198.1 | uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa) |
| | uvrB | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (712 aa) |
| | uvrA | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1009 aa) |
| | uvrC | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (676 aa) |
| | AJE40106.1 | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa) |
| | AJE40087.1 | CRISPR-associated protein Cas2; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa) |
| | cas1 | CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (324 aa) |
| | AJE40085.1 | CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa) |
| | AJE40082.1 | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (962 aa) |
| | AJE40044.1 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa) |
| | AJE40025.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa) |
| | AJE40005.1 | 3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family. (213 aa) |
| | AJE39983.1 | Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family. (355 aa) |
| | AJE39964.1 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. (1163 aa) |
| | AJE39963.1 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA polymerase type-Y family. (324 aa) |
| | AJE39961.1 | RNA-binding protein AU-1; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa) |
| | AJE39912.1 | Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (581 aa) |
| | AJE39885.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa) |
| | AJE39883.1 | Transposase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. (300 aa) |
| | AJE39864.1 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (950 aa) |
| | AJE39859.1 | Pseudouridylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa) |
| | AJE39853.1 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa) |
| | AJE39827.1 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (284 aa) |
| | rlmN | RNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (368 aa) |
| | proS-2 | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...] (566 aa) |
| | truB | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (301 aa) |
| | rnj | Ribonuclease; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (561 aa) |
| | AJE42851.1 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa) |
| | AJE42852.1 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1655 aa) |
| | recA | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (376 aa) |
| | miaA | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (312 aa) |
| | AJE42898.1 | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (718 aa) |
| | AJE42905.1 | DNA topoisomerase IV subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (707 aa) |
| | AJE42918.1 | DNA topoisomerase IV subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (819 aa) |
| | AJE42945.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa) |
| | AJE42950.1 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (442 aa) |
| | AJE42953.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa) |
| | AJE42959.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (75 aa) |
| | AJE42965.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa) |
| | AJE43065.1 | peptidyl-tRNA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa) |
| | AJE43079.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (79 aa) |
| | AJE43116.1 | Adenine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (259 aa) |
| | AJE43185.1 | Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (934 aa) |
| | AJE43188.1 | Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa) |
| | AJE43220.1 | DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (492 aa) |
| | AJE43264.1 | Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa) |
| | AJE43333.1 | Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (694 aa) |
| | AJE43334.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (707 aa) |
| | AJE43335.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (884 aa) |
| | AJE43377.1 | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa) |
| | AJE43416.1 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (715 aa) |
| | AJE43443.1 | Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa) |
| | AJE43444.1 | Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa) |
| | AJE43451.1 | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology. (718 aa) |
| | AJE43459.1 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. (1061 aa) |
| | AJE43461.1 | Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (663 aa) |
| | AJE43471.1 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa) |
| | AJE43517.1 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa) |
| | AJE43518.1 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa) |
| | AJE43529.1 | Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa) |
| | AJE43594.1 | Mobile element protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa) |
| | AJE43597.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa) |
| | AJE43763.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa) |
| | AJE43842.1 | DNA gyrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa) |
| | AJE43887.1 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (837 aa) |
| | AJE43902.1 | Helicase SNF2; Derived by automated computational analysis using gene prediction method: Protein Homology. (873 aa) |
| | AJE43904.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa) |
| | ung-2 | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (225 aa) |
| | AJE43935.1 | Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa) |
| | AJE43948.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa) |
| | AJE43949.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa) |
| | AJE43961.1 | Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa) |
| | rlmG | 50S rRNA methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. (386 aa) |
| | AJE43984.1 | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa) |
| | rho-2 | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (379 aa) |
| | AJE44106.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (995 aa) |
| | AJE44110.1 | Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa) |
| | AJE44423.1 | methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa) |
| | AJE44496.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa) |
| | trpS | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (332 aa) |
| | pheS | phenylalanyl-tRNA synthetase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (374 aa) |
| | pheT | phenylalanyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (836 aa) |
| | AJE39783.1 | rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa) |
| | thrS | threonine--tRNA ligase; Catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. (658 aa) |
| | ruvC | Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (176 aa) |
| | ruvA | ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (201 aa) |
| | ruvB | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (356 aa) |
| | hisS | histidyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa) |
| | alaS | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (890 aa) |
| | rpoZ | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (90 aa) |
| | priA | Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (719 aa) |
| | fmt | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (310 aa) |
| | AJE39709.1 | Ribonuclease N; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa) |
| | AJE39700.1 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa) |
| | dinB | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (483 aa) |
| | ung | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (227 aa) |
| | AJE39594.1 | prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa) |
| | AJE39575.1 | cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa) |
| | AJE39561.1 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa) |
| | ligB | ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (512 aa) |
| | AJE39493.1 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa) |
| | AJE39446.1 | DNA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (286 aa) |
| | AJE39432.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa) |
| | AJE39382.1 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa) |
| | AJE39252.1 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (205 aa) |
| | AJE39244.1 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa) |
| | AJE39232.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa) |
| | AJE39219.1 | Galactosyldiacylglycerol synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa) |
| | AJE39206.1 | alanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa) |
| | AJE39195.1 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (778 aa) |
| | AJE39128.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa) |
| | AJE39037.1 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (654 aa) |
| | AJE38914.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa) |
| | AJE38913.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa) |
| | AJE38912.1 | Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa) |
| | AJE38879.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa) |
| | AJE38803.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa) |
| | proS | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). (471 aa) |
| | mutM | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (291 aa) |
| | rnc | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (271 aa) |
| | AJE42709.1 | Cell division initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa) |
| | AJE42706.1 | ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. (736 aa) |
| | gltX | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (491 aa) |
| | gatB | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (504 aa) |
| | gatA | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (500 aa) |
| | gatC | glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. (98 aa) |
| | ligA | NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. (730 aa) |
| | AJE42590.1 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (726 aa) |
| | nucS | Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. (223 aa) |
| | rho | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (659 aa) |
| | AJE42521.1 | arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa) |
| | AJE42507.1 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa) |
| | AJE42506.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa) |
| | AJE42463.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa) |
| | AJE42404.1 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (713 aa) |
| | AJE42400.1 | Helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. (1061 aa) |
| | AJE42399.1 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (954 aa) |
| | AJE42395.1 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa) |
| | AJE42384.1 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. (785 aa) |
| | AJE42382.1 | NYN domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa) |
| | AJE42364.1 | 3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa) |
| | AJE42349.1 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (64 aa) |
| | rtcB | RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RtcB family. (474 aa) |
| | AJE42310.1 | Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa) |
| | xseA | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (406 aa) |
| | xseB | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (80 aa) |
| | AJE42200.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (70 aa) |
| | AJE42199.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (71 aa) |
| | trpS-2 | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (330 aa) |
| | AJE38679.1 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (495 aa) |
| | AJE38696.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa) |
| | AJE44514.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa) |
| | AJE38699.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa) |
| | AJE38706.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa) |
| | AJE38708.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (957 aa) |
| | AJE38724.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa) |
| | AJE38767.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa) |
| | AJE38781.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa) |
