21 items (Streptomyces nodosus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	AJE39699.1	Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	AJE39820.1	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	AJE44235.1	3-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	AJE44214.1	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
	tdh	L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. (342 aa)
	AJE43592.1	Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
	dnaK2	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (625 aa)
	AJE43279.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
	AJE43204.1	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	AJE42549.1	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	dnaK1	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (611 aa)
	AJE41597.1	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
	AJE41003.1	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
	AJE40798.1	Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
	glyQS	glycyl-tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (460 aa)
	AJE40223.1	Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	AJE40124.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
	AJE39921.1	Zinc-binding alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
	AJE39085.1	Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	dnaK	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (619 aa)
	AJE39373.1	2,3-butanediol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)

Your Current Organism:

Streptomyces nodosus

NCBI taxonomy Id: 40318
Other names: ATCC 14899, ATCC 23942, BCRC 13768, CBS 926.68, CCRC 13768, CCRC:13768, DSM 40109, IFO 12895, ISP 5109, JCM 4297, JCM 4656, KCTC 9035, LMG 19340, LMG:19340, NBRC 12895, NCIMB 12816, NRRL B-2371, NRRL-ISP 5109, RIA 831, S. nodosus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJE39085.1	AJE44214.1	SNOD_02810	SNOD_32665	Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AJE39373.1	AJE44214.1	SNOD_04500	SNOD_32665	2,3-butanediol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
AJE39820.1	AJE41597.1	SNOD_07160	SNOD_17375	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
AJE39820.1	AJE42549.1	SNOD_07160	SNOD_22815	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.887
AJE40223.1	dnaK	SNOD_09395	SNOD_03855	Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.695
AJE40223.1	dnaK1	SNOD_09395	SNOD_17885	Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.695
AJE40223.1	dnaK2	SNOD_09395	SNOD_27100	Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.695
AJE40798.1	dnaK	SNOD_12585	SNOD_03855	Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.695
AJE40798.1	dnaK1	SNOD_12585	SNOD_17885	Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.695
AJE40798.1	dnaK2	SNOD_12585	SNOD_27100	Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.695
AJE41597.1	AJE39820.1	SNOD_17375	SNOD_07160	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
AJE41597.1	AJE42549.1	SNOD_17375	SNOD_22815	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
AJE42549.1	AJE39820.1	SNOD_22815	SNOD_07160	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.887
AJE42549.1	AJE41597.1	SNOD_22815	SNOD_17375	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
AJE44214.1	AJE39085.1	SNOD_32665	SNOD_02810	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AJE44214.1	AJE39373.1	SNOD_32665	SNOD_04500	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2,3-butanediol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
dnaK	AJE40223.1	SNOD_03855	SNOD_09395	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
dnaK	AJE40798.1	SNOD_03855	SNOD_12585	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
dnaK1	AJE40223.1	SNOD_17885	SNOD_09395	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
dnaK1	AJE40798.1	SNOD_17885	SNOD_12585	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695

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