STRINGSTRING
AJE43975.1 AJE43975.1 AJE44151.1 AJE44151.1 AJE44325.1 AJE44325.1 AJE40105.1 AJE40105.1 AJE39240.1 AJE39240.1 AJE39239.1 AJE39239.1 AJE40108.1 AJE40108.1 AJE41292.1 AJE41292.1 AJE43509.1 AJE43509.1 AJE39172.1 AJE39172.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJE43975.1Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (813 aa)
AJE44151.1Coagulation factor 5/8 type domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (723 aa)
AJE44325.1Secreted glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1423 aa)
AJE40105.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (78 aa)
AJE39240.1Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
AJE39239.1Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
AJE40108.1Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
AJE41292.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
AJE43509.1Mycodextranase; Derived by automated computational analysis using gene prediction method: Protein Homology. (722 aa)
AJE39172.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (738 aa)
Your Current Organism:
Streptomyces nodosus
NCBI taxonomy Id: 40318
Other names: ATCC 14899, ATCC 23942, BCRC 13768, CBS 926.68, CCRC 13768, CCRC:13768, DSM 40109, IFO 12895, ISP 5109, JCM 4297, JCM 4656, KCTC 9035, LMG 19340, LMG:19340, NBRC 12895, NCIMB 12816, NRRL B-2371, NRRL-ISP 5109, RIA 831, S. nodosus
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