Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJE40545.1 | AJE41297.1 | SNOD_11165 | SNOD_15560 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-ketoacyl ACP synthase beta; Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.985 |
| AJE40545.1 | AJE43584.1 | SNOD_11165 | SNOD_28845 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.968 |
| AJE40545.1 | AJE43586.1 | SNOD_11165 | SNOD_28860 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.660 |
| AJE40545.1 | AJE43588.1 | SNOD_11165 | SNOD_28870 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.907 |
| AJE40545.1 | AJE43678.1 | SNOD_11165 | SNOD_29440 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-ketoacyl ACP synthase beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.985 |
| AJE40545.1 | AJE44064.1 | SNOD_11165 | SNOD_31755 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Contains ketosynthase and ACP domains; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| AJE40545.1 | AJE44355.1 | SNOD_11165 | SNOD_33510 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.887 |
| AJE40545.1 | amphA | SNOD_11165 | SNOD_02605 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Amphotericin polyketide synthase loading module. | 0.946 |
| AJE40545.1 | amphB | SNOD_11165 | SNOD_02582 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Amphotericin polyketide synthase modules 1 and 2. | 0.987 |
| AJE40545.1 | amphC | SNOD_11165 | SNOD_02581 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Amphotericin polyketide synthase modules 3 to 8. | 0.942 |
| AJE40545.1 | amphI | SNOD_11165 | SNOD_02660 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Amphotericin polyketide synthase modules 9 to 14; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.942 |
| AJE40545.1 | amphJ | SNOD_11165 | SNOD_02655 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Amphotericin polyketide synthase modules 15 to 17. | 0.686 |
| AJE40545.1 | amphK | SNOD_11165 | SNOD_02650 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Amphotericin polyketide synthase module 18 and chain-terminating thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.703 |
| AJE41297.1 | AJE40545.1 | SNOD_15560 | SNOD_11165 | 3-ketoacyl ACP synthase beta; Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.985 |
| AJE41297.1 | AJE41298.1 | SNOD_15560 | SNOD_15565 | 3-ketoacyl ACP synthase beta; Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-ketoacyl-ACP synthase alpha; Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
| AJE41297.1 | AJE43586.1 | SNOD_15560 | SNOD_28860 | 3-ketoacyl ACP synthase beta; Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.652 |
| AJE41297.1 | AJE43588.1 | SNOD_15560 | SNOD_28870 | 3-ketoacyl ACP synthase beta; Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.985 |
| AJE41297.1 | AJE43679.1 | SNOD_15560 | SNOD_29445 | 3-ketoacyl ACP synthase beta; Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-ketoacyl ACP synthase alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.998 |
| AJE41297.1 | AJE44064.1 | SNOD_15560 | SNOD_31755 | 3-ketoacyl ACP synthase beta; Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Contains ketosynthase and ACP domains; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.835 |
| AJE41297.1 | AJE44355.1 | SNOD_15560 | SNOD_33510 | 3-ketoacyl ACP synthase beta; Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.887 |
page 1 of 13