STRINGSTRING
AJE38957.1 AJE38957.1 AJE42062.1 AJE42062.1 AJE42063.1 AJE42063.1 AJE42232.1 AJE42232.1 AJE42282.1 AJE42282.1 ispH ispH AJE42457.1 AJE42457.1 AJE42561.1 AJE42561.1 AJE42606.1 AJE42606.1 trmD trmD ispG ispG AJE43066.1 AJE43066.1 AJE43072.1 AJE43072.1 AJE43210.1 AJE43210.1 AJE43211.1 AJE43211.1 idi idi AJE43554.1 AJE43554.1 ispG-2 ispG-2 dxs dxs AJE43901.1 AJE43901.1 AJE43924.1 AJE43924.1 AJE44088.1 AJE44088.1 AJE44089.1 AJE44089.1 AJE44218.1 AJE44218.1 AJE41942.1 AJE41942.1 ispD ispD ispF ispF ispE ispE AJE41035.1 AJE41035.1 AJE40854.1 AJE40854.1 AJE40649.1 AJE40649.1 AJE40584.1 AJE40584.1 htpX htpX AJE39954.1 AJE39954.1 AJE39924.1 AJE39924.1 AJE39402.1 AJE39402.1 AJE39222.1 AJE39222.1 htpX-2 htpX-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJE38957.1Polyprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family. (344 aa)
AJE42062.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
AJE42063.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
AJE42232.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)
AJE42282.1UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (257 aa)
ispH4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (334 aa)
AJE42457.1Polyprenyl synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family. (361 aa)
AJE42561.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
AJE42606.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
trmDtRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (277 aa)
ispG4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (385 aa)
AJE43066.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
AJE43072.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
AJE43210.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
AJE43211.11,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (344 aa)
idiIsopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). (197 aa)
AJE43554.1Dimethylallyltranstransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family. (354 aa)
ispG-24-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (393 aa)
dxs1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (631 aa)
AJE43901.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
AJE43924.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
AJE44088.1Peptidase M48 Ste24p; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
AJE44089.1Peptidase M48 Ste24p; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)
AJE44218.1Polysaccharide/chitin/xylan deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
AJE41942.1Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family. (336 aa)
ispD2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (254 aa)
ispF2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (164 aa)
ispE4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (297 aa)
AJE41035.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa)
AJE40854.1Peptidase, M48 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
AJE40649.1Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
AJE40584.1UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (278 aa)
htpXHeat shock protein HtpX; Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family. (306 aa)
AJE39954.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
AJE39924.1NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
AJE39402.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
AJE39222.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
htpX-2Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family. (287 aa)
Your Current Organism:
Streptomyces nodosus
NCBI taxonomy Id: 40318
Other names: ATCC 14899, ATCC 23942, BCRC 13768, CBS 926.68, CCRC 13768, CCRC:13768, DSM 40109, IFO 12895, ISP 5109, JCM 4297, JCM 4656, KCTC 9035, LMG 19340, LMG:19340, NBRC 12895, NCIMB 12816, NRRL B-2371, NRRL-ISP 5109, RIA 831, S. nodosus
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