Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJE39913.1 | ddl | SNOD_07655 | SNOD_23645 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.485 |
| AJE39913.1 | mraY | SNOD_07655 | SNOD_09745 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.419 |
| AJE39913.1 | murF | SNOD_07655 | SNOD_09750 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.507 |
| AJE40285.1 | AJE41535.1 | SNOD_09735 | SNOD_17025 | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | Peptidoglycan bridge formation protein FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.725 |
| AJE40285.1 | AJE42050.1 | SNOD_09735 | SNOD_19950 | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.588 |
| AJE40285.1 | ddl | SNOD_09735 | SNOD_23645 | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.910 |
| AJE40285.1 | mraY | SNOD_09735 | SNOD_09745 | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.974 |
| AJE40285.1 | murF | SNOD_09735 | SNOD_09750 | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.987 |
| AJE40285.1 | murG | SNOD_09735 | SNOD_09730 | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.959 |
| AJE40415.1 | AJE41627.1 | SNOD_10420 | SNOD_17545 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
| AJE40415.1 | AJE43298.1 | SNOD_10420 | SNOD_27165 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.897 |
| AJE41535.1 | AJE40285.1 | SNOD_17025 | SNOD_09735 | Peptidoglycan bridge formation protein FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | 0.725 |
| AJE41535.1 | AJE41536.1 | SNOD_17025 | SNOD_17030 | Peptidoglycan bridge formation protein FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.948 |
| AJE41535.1 | AJE43299.1 | SNOD_17025 | SNOD_27170 | Peptidoglycan bridge formation protein FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.507 |
| AJE41535.1 | AJE43300.1 | SNOD_17025 | SNOD_27175 | Peptidoglycan bridge formation protein FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
| AJE41535.1 | murG | SNOD_17025 | SNOD_09730 | Peptidoglycan bridge formation protein FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.831 |
| AJE41536.1 | AJE41535.1 | SNOD_17030 | SNOD_17025 | Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidoglycan bridge formation protein FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.948 |
| AJE41536.1 | ddl | SNOD_17030 | SNOD_23645 | Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.574 |
| AJE41536.1 | mraY | SNOD_17030 | SNOD_09745 | Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.427 |
| AJE41536.1 | murF | SNOD_17030 | SNOD_09750 | Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.572 |
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