STRINGSTRING
BDEG_20169 BDEG_20169 BDEG_20325 BDEG_20325 BDEG_20059 BDEG_20059 BDEG_20125 BDEG_20125 BDEG_20324 BDEG_20324 BDEG_20046 BDEG_20046 BDEG_20817 BDEG_20817 BDEG_20903 BDEG_20903 BDEG_20638 BDEG_20638 BDEG_20605 BDEG_20605 BDEG_20697 BDEG_20697 BDEG_20726 BDEG_20726 BDEG_20820 BDEG_20820 BDEG_21428 BDEG_21428 BDEG_21549 BDEG_21549 BDEG_21328 BDEG_21328 BDEG_21422 BDEG_21422 BDEG_21845 BDEG_21845 BDEG_21829 BDEG_21829 BDEG_21805 BDEG_21805 BDEG_22137 BDEG_22137 BDEG_22253 BDEG_22253 BDEG_22220 BDEG_22220 BDEG_22556 BDEG_22556 BDEG_22252 BDEG_22252 BDEG_22344 BDEG_22344 BDEG_22251 BDEG_22251 BDEG_21970 BDEG_21970 BDEG_22736 BDEG_22736 BDEG_22837 BDEG_22837 BDEG_22914 BDEG_22914 BDEG_22936 BDEG_22936 BDEG_22688 BDEG_22688 BDEG_22710 BDEG_22710 BDEG_22520 BDEG_22520 BDEG_23090 BDEG_23090 BDEG_22799 BDEG_22799 BDEG_22444 BDEG_22444 BDEG_22862 BDEG_22862 BDEG_22749 BDEG_22749 BDEG_23022 BDEG_23022 BDEG_23098 BDEG_23098 BDEG_23146 BDEG_23146 BDEG_22944 BDEG_22944 BDEG_23484 BDEG_23484 BDEG_23074 BDEG_23074 BDEG_23650 BDEG_23650 BDEG_23545 BDEG_23545 BDEG_23847 BDEG_23847 BDEG_23882 BDEG_23882 BDEG_23485 BDEG_23485 BDEG_23504 BDEG_23504 BDEG_23670 BDEG_23670 BDEG_23580 BDEG_23580 BDEG_24000 BDEG_24000 BDEG_24044 BDEG_24044 BDEG_23558 BDEG_23558 BDEG_23835 BDEG_23835 BDEG_23909 BDEG_23909 BDEG_24031 BDEG_24031 BDEG_24019 BDEG_24019 BDEG_24201 BDEG_24201 BDEG_24222 BDEG_24222 BDEG_23884 BDEG_23884 BDEG_24284 BDEG_24284 BDEG_24392 BDEG_24392 BDEG_24664 BDEG_24664 BDEG_24326 BDEG_24326 BDEG_24334 BDEG_24334 BDEG_24351 BDEG_24351 BDEG_24787 BDEG_24787 BDEG_24852 BDEG_24852 BDEG_24881 BDEG_24881 BDEG_24658 BDEG_24658 BDEG_24654 BDEG_24654 BDEG_24903 BDEG_24903 BDEG_24943 BDEG_24943 BDEG_24806 BDEG_24806 BDEG_24534 BDEG_24534 BDEG_25181 BDEG_25181 BDEG_24936 BDEG_24936 BDEG_25167 BDEG_25167 BDEG_24827 BDEG_24827 BDEG_25069 BDEG_25069 BDEG_25246 BDEG_25246 BDEG_24942 BDEG_24942 BDEG_25451 BDEG_25451 BDEG_25463 BDEG_25463 BDEG_25718 BDEG_25718 BDEG_25127 BDEG_25127 BDEG_26017 BDEG_26017 BDEG_26068 BDEG_26068 BDEG_25828 BDEG_25828 BDEG_26079 BDEG_26079 BDEG_25769 BDEG_25769 BDEG_26432 BDEG_26432 BDEG_26453 BDEG_26453 BDEG_25760 BDEG_25760 BDEG_26482 BDEG_26482 BDEG_26064 BDEG_26064 BDEG_26100 BDEG_26100 BDEG_26568 BDEG_26568 BDEG_26308 BDEG_26308 BDEG_25943 BDEG_25943 BDEG_26922 BDEG_26922 BDEG_26947 BDEG_26947 BDEG_26953 BDEG_26953 BDEG_26516 BDEG_26516 BDEG_26580 BDEG_26580 BDEG_26565 BDEG_26565 BDEG_27034 BDEG_27034 BDEG_26494 BDEG_26494 BDEG_26670 BDEG_26670 BDEG_27106 BDEG_27106 BDEG_27072 BDEG_27072 BDEG_27015 BDEG_27015 BDEG_27536 BDEG_27536 BDEG_27290 BDEG_27290 BDEG_27594 BDEG_27594 BDEG_27671 BDEG_27671 BDEG_27542 BDEG_27542 BDEG_27964 BDEG_27964 BDEG_27680 BDEG_27680 BDEG_28179 BDEG_28179 BDEG_28111 BDEG_28111 BDEG_27996 BDEG_27996 BDEG_28516 BDEG_28516 BDEG_28181 BDEG_28181
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BDEG_20169BTP domain-containing protein. (288 aa)
BDEG_20325Uncharacterized protein. (870 aa)
BDEG_20059Protein kinase domain-containing protein. (1247 aa)
BDEG_20125Uncharacterized protein. (180 aa)
BDEG_20324Uncharacterized protein. (112 aa)
BDEG_20046Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (331 aa)
BDEG_20817Uncharacterized protein. (823 aa)
BDEG_20903Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (786 aa)
BDEG_20638Uncharacterized protein. (745 aa)
BDEG_20605TAFII55_N domain-containing protein. (563 aa)
BDEG_20697SAP30_Sin3_bdg domain-containing protein. (168 aa)
BDEG_20726Uncharacterized protein. (317 aa)
BDEG_20820Myb_DNA-bind_7 domain-containing protein. (752 aa)
BDEG_21428CTK3_C domain-containing protein. (502 aa)
BDEG_21549Uncharacterized protein. (256 aa)
BDEG_21328C2H2-type domain-containing protein. (723 aa)
BDEG_21422Uncharacterized protein. (597 aa)
BDEG_21845Uncharacterized protein. (639 aa)
BDEG_21829Uncharacterized protein. (876 aa)
BDEG_21805RNA polymerase Rpb6. (148 aa)
BDEG_22137Uncharacterized protein. (751 aa)
BDEG_22253TFIIS N-terminal domain-containing protein. (145 aa)
BDEG_22220FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (591 aa)
BDEG_22556TFIID_20kDa domain-containing protein. (1148 aa)
BDEG_22252Uncharacterized protein. (109 aa)
BDEG_22344Uncharacterized protein. (751 aa)
BDEG_22251Uncharacterized protein. (408 aa)
BDEG_21970DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (139 aa)
BDEG_22736DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (326 aa)
BDEG_22837Uncharacterized protein. (335 aa)
BDEG_22914Uncharacterized protein. (203 aa)
BDEG_22936Uncharacterized protein. (404 aa)
BDEG_22688BTB domain-containing protein. (528 aa)
BDEG_22710Uncharacterized protein. (230 aa)
BDEG_22520Uncharacterized protein. (249 aa)
BDEG_23090DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1409 aa)
BDEG_22799Uncharacterized protein. (328 aa)
BDEG_22444Uncharacterized protein. (986 aa)
BDEG_22862Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (160 aa)
BDEG_22749Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1687 aa)
BDEG_23022Bromo domain-containing protein. (1244 aa)
BDEG_23098Plus3 domain-containing protein. (590 aa)
BDEG_23146RNA polymerase Rpb3/RpoA insert domain-containing protein. (348 aa)
BDEG_22944DNA-directed RNA polymerase I, II, and III subunit RPABC5. (98 aa)
BDEG_23484Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (607 aa)
BDEG_23074Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (257 aa)
BDEG_23650Cyclin domain-containing protein; Belongs to the cyclin family. (354 aa)
BDEG_23545WD_REPEATS_REGION domain-containing protein. (647 aa)
BDEG_23847Uncharacterized protein. (461 aa)
BDEG_23882Uncharacterized protein. (525 aa)
BDEG_23485Uncharacterized protein. (943 aa)
BDEG_23504Uncharacterized protein. (752 aa)
BDEG_23670Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (106 aa)
BDEG_23580Helicase ATP-binding domain-containing protein. (1034 aa)
BDEG_24000Uncharacterized protein. (487 aa)
BDEG_24044Uncharacterized protein. (813 aa)
BDEG_23558Bromo domain-containing protein. (2295 aa)
BDEG_23835Uncharacterized protein. (858 aa)
BDEG_23909DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1706 aa)
BDEG_24031DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1743 aa)
BDEG_24019DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (216 aa)
BDEG_24201RPOL4c domain-containing protein. (138 aa)
BDEG_24222DNA-directed RNA polymerase. (212 aa)
BDEG_23884DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1811 aa)
BDEG_24284Uncharacterized protein. (611 aa)
BDEG_24392RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein. (125 aa)
BDEG_24664Cyclin domain-containing protein. (305 aa)
BDEG_24326Uncharacterized protein. (1496 aa)
BDEG_24334General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (424 aa)
BDEG_24351Protein kinase domain-containing protein. (1048 aa)
BDEG_24787Repressor of RNA polymerase III transcription MAF1; Mediator of diverse signals that repress RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (251 aa)
BDEG_24852Uncharacterized protein. (360 aa)
BDEG_24881DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1214 aa)
BDEG_24658Cyclin domain-containing protein. (306 aa)
BDEG_24654Uncharacterized protein. (655 aa)
BDEG_24903Uncharacterized protein. (110 aa)
BDEG_24943Uncharacterized protein. (81 aa)
BDEG_24806RPOL4c domain-containing protein. (133 aa)
BDEG_24534Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (111 aa)
BDEG_25181Helicase ATP-binding domain-containing protein. (1195 aa)
BDEG_24936Uncharacterized protein. (78 aa)
BDEG_25167Uncharacterized protein. (851 aa)
BDEG_24827RTR1-type domain-containing protein. (683 aa)
BDEG_25069Helicase ATP-binding domain-containing protein. (688 aa)
BDEG_25246TFIIB-type domain-containing protein. (483 aa)
BDEG_24942Helicase ATP-binding domain-containing protein. (691 aa)
BDEG_25451RNA polymerase Rpb5 domain-containing protein. (207 aa)
BDEG_25463TFIIB-type domain-containing protein. (335 aa)
BDEG_25718Uncharacterized protein. (397 aa)
BDEG_25127Uncharacterized protein. (333 aa)
BDEG_26017Uncharacterized protein. (508 aa)
BDEG_26068C2H2-type domain-containing protein. (710 aa)
BDEG_25828Uncharacterized protein. (279 aa)
BDEG_26079Cyclin domain-containing protein; Belongs to the cyclin family. (464 aa)
BDEG_25769RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein, variant. (130 aa)
BDEG_26432TFIIE alpha subunit. (336 aa)
BDEG_26453Cyclin domain-containing protein; Belongs to the cyclin family. (446 aa)
BDEG_25760Uncharacterized protein. (269 aa)
BDEG_26482Transcription elongation factor S-II. (282 aa)
BDEG_26064DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1710 aa)
BDEG_26100DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
BDEG_26568Uncharacterized protein. (299 aa)
BDEG_26308Uncharacterized protein. (556 aa)
BDEG_25943Uncharacterized protein. (339 aa)
BDEG_26922Uncharacterized protein. (1183 aa)
BDEG_26947RNA polymerase Rpb3/RpoA insert domain-containing protein. (285 aa)
BDEG_26953FCP1 homology domain-containing protein. (873 aa)
BDEG_26516Uncharacterized protein. (607 aa)
BDEG_26580Uncharacterized protein. (368 aa)
BDEG_26565Uncharacterized protein. (399 aa)
BDEG_27034Uncharacterized protein. (234 aa)
BDEG_26494Uncharacterized protein. (526 aa)
BDEG_26670Uncharacterized protein. (739 aa)
BDEG_27106Uncharacterized protein. (701 aa)
BDEG_27072Uncharacterized protein. (832 aa)
BDEG_27015TATA-box-binding protein. (137 aa)
BDEG_27536VWFA domain-containing protein. (314 aa)
BDEG_27290Protein kinase domain-containing protein. (370 aa)
BDEG_27594TAFII28 domain-containing protein. (247 aa)
BDEG_27671RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (432 aa)
BDEG_27542TAF domain-containing protein. (457 aa)
BDEG_27964Uncharacterized protein. (506 aa)
BDEG_27680CDK-activating kinase assembly factor MAT1. (256 aa)
BDEG_28179RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (414 aa)
BDEG_28111Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (116 aa)
BDEG_27996TFIIS central domain-containing protein. (799 aa)
BDEG_28516C2H2-type domain-containing protein. (994 aa)
BDEG_28181Uncharacterized protein. (1037 aa)
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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