(15 nodes) Transcription factor TFIIH holo complex, and Transcription initiation from RNA polymerase II promoter network (Batrachochytrium dendrobatidis JEL423)

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Your Input:
	BDEG_20903	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (786 aa)
	BDEG_20726	Uncharacterized protein. (317 aa)
	BDEG_21549	Uncharacterized protein. (256 aa)
	BDEG_23074	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (257 aa)
	BDEG_23670	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (106 aa)
	BDEG_24334	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (424 aa)
	BDEG_25069	Helicase ATP-binding domain-containing protein. (688 aa)
	BDEG_25463	TFIIB-type domain-containing protein. (335 aa)
	BDEG_26432	TFIIE alpha subunit. (336 aa)
	BDEG_25760	Uncharacterized protein. (269 aa)
	BDEG_26568	Uncharacterized protein. (299 aa)
	BDEG_26308	Uncharacterized protein. (556 aa)
	BDEG_27290	Protein kinase domain-containing protein. (370 aa)
	BDEG_27680	CDK-activating kinase assembly factor MAT1. (256 aa)
	BDEG_28179	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (414 aa)

Your Current Organism:

Batrachochytrium dendrobatidis JEL423

NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDEG_20726	BDEG_20903	A0A177WA36	A0A177W9J5	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.961
BDEG_20726	BDEG_21549	A0A177WA36	A0A177WBT2	Uncharacterized protein.	Uncharacterized protein.	0.941
BDEG_20726	BDEG_23074	A0A177WA36	A0A177WI76	Uncharacterized protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.965
BDEG_20726	BDEG_23670	A0A177WA36	A0A177WJA2	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.999
BDEG_20726	BDEG_24334	A0A177WA36	A0A177WLQ6	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.961
BDEG_20726	BDEG_25069	A0A177WA36	A0A177WP89	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.946
BDEG_20726	BDEG_25463	A0A177WA36	A0A177WQ41	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.978
BDEG_20726	BDEG_25760	A0A177WA36	A0A177WSG3	Uncharacterized protein.	Uncharacterized protein.	0.944
BDEG_20726	BDEG_26308	A0A177WA36	A0A177WSX7	Uncharacterized protein.	Uncharacterized protein.	0.947
BDEG_20726	BDEG_26432	A0A177WA36	A0A177WSD1	Uncharacterized protein.	TFIIE alpha subunit.	0.968
BDEG_20726	BDEG_26568	A0A177WA36	A0A177WSU0	Uncharacterized protein.	Uncharacterized protein.	0.971
BDEG_20726	BDEG_27290	A0A177WA36	A0A177WWH1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.791
BDEG_20726	BDEG_27680	A0A177WA36	A0A177WXV2	Uncharacterized protein.	CDK-activating kinase assembly factor MAT1.	0.947
BDEG_20726	BDEG_28179	A0A177WA36	A0A177WY26	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.960
BDEG_20903	BDEG_20726	A0A177W9J5	A0A177WA36	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.961
BDEG_20903	BDEG_21549	A0A177W9J5	A0A177WBT2	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.946
BDEG_20903	BDEG_23074	A0A177W9J5	A0A177WI76	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.984
BDEG_20903	BDEG_23670	A0A177W9J5	A0A177WJA2	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.966
BDEG_20903	BDEG_24334	A0A177W9J5	A0A177WLQ6	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.958
BDEG_20903	BDEG_25069	A0A177W9J5	A0A177WP89	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Helicase ATP-binding domain-containing protein.	0.956