STRINGSTRING
BDEG_28648 BDEG_28648 BDEG_20056 BDEG_20056 BDEG_20132 BDEG_20132 BDEG_20155 BDEG_20155 BDEG_20290 BDEG_20290 BDEG_20300 BDEG_20300 SPB1 SPB1 BDEG_20382 BDEG_20382 BDEG_20236 BDEG_20236 BDEG_20215 BDEG_20215 BDEG_20540 BDEG_20540 BDEG_20176 BDEG_20176 NAT10 NAT10 BDEG_20230 BDEG_20230 BDEG_20341 BDEG_20341 BDEG_20331 BDEG_20331 BDEG_20725 BDEG_20725 BDEG_20771 BDEG_20771 BDEG_20591 BDEG_20591 BDEG_20231 BDEG_20231 BDEG_20833 BDEG_20833 BDEG_20590 BDEG_20590 BDEG_20642 BDEG_20642 BDEG_20580 BDEG_20580 BDEG_20687 BDEG_20687 BDEG_20516 BDEG_20516 BDEG_20921 BDEG_20921 BDEG_21152 BDEG_21152 BDEG_20953 BDEG_20953 BDEG_21275 BDEG_21275 BDEG_21311 BDEG_21311 BDEG_21190 BDEG_21190 BDEG_21318 BDEG_21318 BDEG_21307 BDEG_21307 BDEG_21223 BDEG_21223 BDEG_21713 BDEG_21713 BDEG_21789 BDEG_21789 BDEG_22143 BDEG_22143 BDEG_21784 BDEG_21784 BDEG_21533 BDEG_21533 BDEG_22274 BDEG_22274 BDEG_22275 BDEG_22275 BDEG_21964 BDEG_21964 BDEG_21707 BDEG_21707 BDEG_22049 BDEG_22049 BDEG_22442 BDEG_22442 BDEG_22128 BDEG_22128 BDEG_22585 BDEG_22585 BDEG_22693 BDEG_22693 BDEG_22732 BDEG_22732 BDEG_22838 BDEG_22838 BDEG_22561 BDEG_22561 BDEG_22853 BDEG_22853 BDEG_22419 BDEG_22419 BDEG_22992 BDEG_22992 BDEG_23062 BDEG_23062 BDEG_23021 BDEG_23021 BDEG_23151 BDEG_23151 BDEG_22855 BDEG_22855 BDEG_22913 BDEG_22913 BDEG_23302 BDEG_23302 BDEG_23262 BDEG_23262 BDEG_23356 BDEG_23356 BDEG_23032 BDEG_23032 BDEG_23031 BDEG_23031 BDEG_22927 BDEG_22927 BDEG_23488 BDEG_23488 BDEG_23498 BDEG_23498 BDEG_23517 BDEG_23517 BDEG_22851 BDEG_22851 BDEG_23265 BDEG_23265 BDEG_23582 BDEG_23582 BDEG_23256 BDEG_23256 BDEG_23361 BDEG_23361 BDEG_23374 BDEG_23374 BDEG_23242 BDEG_23242 BDEG_23644 BDEG_23644 BDEG_24067 BDEG_24067 BDEG_23821 BDEG_23821 BDEG_24213 BDEG_24213 BDEG_24510 BDEG_24510 BDEG_24264 BDEG_24264 BDEG_24309 BDEG_24309 BDEG_24372 BDEG_24372 BDEG_24729 BDEG_24729 BDEG_24116 BDEG_24116 BDEG_24843 BDEG_24843 BDEG_24861 BDEG_24861 BDEG_24298 BDEG_24298 BDEG_24908 BDEG_24908 BDEG_24696 BDEG_24696 BDEG_24717 BDEG_24717 BDEG_24725 BDEG_24725 BDEG_24770 BDEG_24770 BDEG_24990 BDEG_24990 BDEG_24905 BDEG_24905 BDEG_25067 BDEG_25067 BDEG_24946 BDEG_24946 BDEG_24676 BDEG_24676 BDEG_25371 BDEG_25371 BDEG_25377 BDEG_25377 BDEG_25229 BDEG_25229 BDEG_25706 BDEG_25706 BDEG_25734 BDEG_25734 BDEG_25435 BDEG_25435 BDEG_25644 BDEG_25644 BDEG_25241 BDEG_25241 BDEG_26142 BDEG_26142 BDEG_25826 BDEG_25826 NOP7 NOP7 BDEG_26471 BDEG_26471 BDEG_25816 BDEG_25816 BDEG_26538 BDEG_26538 BDEG_26553 BDEG_26553 BDEG_26225 BDEG_26225 BDEG_26826 BDEG_26826 TIF6 TIF6 BDEG_26914 BDEG_26914 BDEG_26470 BDEG_26470 YTM1 YTM1 BDEG_26338 BDEG_26338 BDEG_27013 BDEG_27013 BDEG_26608 BDEG_26608 BDEG_26825 BDEG_26825 BDEG_27071 BDEG_27071 BDEG_26483 BDEG_26483 BDEG_27103 BDEG_27103 BDEG_26541 BDEG_26541 BDEG_26652 BDEG_26652 BDEG_27270 BDEG_27270 BDEG_26920 BDEG_26920 BDEG_27008 BDEG_27008 BDEG_27354 BDEG_27354 BDEG_27379 BDEG_27379 BDEG_27409 BDEG_27409 BDEG_27339 BDEG_27339 BDEG_27561 BDEG_27561 BDEG_27438 BDEG_27438 ERB1 ERB1 BDEG_27681 BDEG_27681 BDEG_27950 BDEG_27950 BDEG_27601 BDEG_27601 BDEG_28011 BDEG_28011 BDEG_27593 BDEG_27593 BDEG_28205 BDEG_28205 BDEG_28258 BDEG_28258 BDEG_28262 BDEG_28262 BDEG_27906 BDEG_27906 BDEG_28164 BDEG_28164
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BDEG_28648RRM domain-containing protein. (358 aa)
BDEG_20056Uncharacterized protein. (307 aa)
BDEG_20132KH_dom_type_1 domain-containing protein. (234 aa)
BDEG_20155Uncharacterized protein. (671 aa)
BDEG_20290RNA helicase. (896 aa)
BDEG_20300Uncharacterized protein. (965 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (896 aa)
BDEG_20382RNA helicase. (583 aa)
BDEG_2023618S rRNA biogenesis protein RCL1. (378 aa)
BDEG_20215Ribosome biogenesis protein nsa2. (261 aa)
BDEG_20540Uncharacterized protein. (378 aa)
BDEG_20176SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (751 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1173 aa)
BDEG_20230ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family. (358 aa)
BDEG_20341RNase_PH domain-containing protein. (253 aa)
BDEG_20331WD_REPEATS_REGION domain-containing protein. (491 aa)
BDEG_20725Nop domain-containing protein. (515 aa)
BDEG_20771NUC173 domain-containing protein. (1451 aa)
BDEG_20591Uncharacterized protein. (1242 aa)
BDEG_20231Helicase C-terminal domain-containing protein. (132 aa)
BDEG_20833Protein kinase domain-containing protein. (600 aa)
BDEG_20590Ribosomal protein L1p/L10e family protein. (340 aa)
BDEG_20642PINc domain-containing protein. (193 aa)
BDEG_20580Uncharacterized protein; Belongs to the DEAD box helicase family. (553 aa)
BDEG_2068760S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
BDEG_20516Uncharacterized protein. (488 aa)
BDEG_20921WD_REPEATS_REGION domain-containing protein. (899 aa)
BDEG_21152Uncharacterized protein. (1412 aa)
BDEG_20953Uncharacterized protein; Belongs to the DEAD box helicase family. (487 aa)
BDEG_21275Ribosomal protein L24e. (160 aa)
BDEG_21311Ribosomal L28e protein family. (798 aa)
BDEG_21190WD_REPEATS_REGION domain-containing protein. (613 aa)
BDEG_21318G domain-containing protein. (518 aa)
BDEG_21307Uncharacterized protein. (285 aa)
BDEG_21223Uncharacterized protein. (279 aa)
BDEG_21713ATP-dependent RNA helicase DBP10. (1118 aa)
BDEG_21789WD_REPEATS_REGION domain-containing protein. (542 aa)
BDEG_22143C2H2-type domain-containing protein. (115 aa)
BDEG_21784Uncharacterized protein. (165 aa)
BDEG_21533Uncharacterized protein. (1123 aa)
BDEG_22274Uncharacterized protein. (608 aa)
BDEG_22275Uncharacterized protein; Belongs to the DEAD box helicase family. (513 aa)
BDEG_21964Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (691 aa)
BDEG_21707WD_REPEATS_REGION domain-containing protein. (495 aa)
BDEG_22049Bms1-type G domain-containing protein. (820 aa)
BDEG_22442RNase_PH domain-containing protein. (248 aa)
BDEG_22128Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (700 aa)
BDEG_22585Uncharacterized protein. (392 aa)
BDEG_22693Uncharacterized protein. (771 aa)
BDEG_22732Brix domain-containing protein. (390 aa)
BDEG_22838Uncharacterized protein. (241 aa)
BDEG_22561Uncharacterized protein. (625 aa)
BDEG_22853U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (420 aa)
BDEG_22419Uncharacterized protein. (978 aa)
BDEG_22992Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (460 aa)
BDEG_23062WD_REPEATS_REGION domain-containing protein. (877 aa)
BDEG_23021Uncharacterized protein. (417 aa)
BDEG_23151Brix domain-containing protein. (284 aa)
BDEG_22855KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (369 aa)
BDEG_22913WD_REPEATS_REGION domain-containing protein. (647 aa)
BDEG_23302Brix domain-containing protein. (300 aa)
BDEG_23262Uncharacterized protein. (225 aa)
BDEG_23356Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (563 aa)
BDEG_23032CBF domain-containing protein. (93 aa)
BDEG_23031CBF domain-containing protein. (376 aa)
BDEG_22927Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (635 aa)
BDEG_23488WD_REPEATS_REGION domain-containing protein. (560 aa)
BDEG_23498Uncharacterized protein. (1454 aa)
BDEG_23517NUC153 domain-containing protein. (698 aa)
BDEG_22851U3 small nucleolar RNA-associated protein 22. (1256 aa)
BDEG_23265Uncharacterized protein. (351 aa)
BDEG_23582RNA helicase. (659 aa)
BDEG_23256RNB domain-containing protein; Belongs to the RNR ribonuclease family. (1079 aa)
BDEG_23361WD_REPEATS_REGION domain-containing protein. (973 aa)
BDEG_23374CBF domain-containing protein. (1171 aa)
BDEG_23242Uncharacterized protein. (775 aa)
BDEG_23644Uncharacterized protein. (1485 aa)
BDEG_24067PUM-HD domain-containing protein. (781 aa)
BDEG_23821Uncharacterized protein; Belongs to the DEAD box helicase family. (741 aa)
BDEG_24213Ferrous iron transporter B. (617 aa)
BDEG_24510Casein kinase I; Belongs to the protein kinase superfamily. (414 aa)
BDEG_24264Uncharacterized protein. (527 aa)
BDEG_24309Uncharacterized protein. (319 aa)
BDEG_24372RNA helicase. (848 aa)
BDEG_24729Uncharacterized protein. (503 aa)
BDEG_2411620S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (446 aa)
BDEG_24843U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (279 aa)
BDEG_24861Uncharacterized protein. (376 aa)
BDEG_24298Uncharacterized protein; Belongs to the DEAD box helicase family. (752 aa)
BDEG_24908Uncharacterized protein. (289 aa)
BDEG_24696Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (164 aa)
BDEG_24717Uncharacterized protein. (903 aa)
BDEG_24725RIO domain-containing protein. (531 aa)
BDEG_24770Uncharacterized protein. (235 aa)
BDEG_24990MI domain-containing protein. (874 aa)
BDEG_24905S1 motif domain-containing protein. (156 aa)
BDEG_25067Sas10 domain-containing protein. (634 aa)
BDEG_24946Ferrous iron transporter B. (750 aa)
BDEG_24676Uncharacterized protein; Belongs to the RNR ribonuclease family. (968 aa)
BDEG_25371Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (292 aa)
BDEG_25377Brix domain-containing protein. (247 aa)
BDEG_25229Uncharacterized protein. (1115 aa)
BDEG_25706BP28CT domain-containing protein. (2101 aa)
BDEG_25734Uncharacterized protein. (994 aa)
BDEG_25435WD_REPEATS_REGION domain-containing protein. (975 aa)
BDEG_25644Uncharacterized protein. (311 aa)
BDEG_25241Importin N-terminal domain-containing protein. (1054 aa)
BDEG_26142Uncharacterized protein. (2345 aa)
BDEG_25826Uncharacterized protein. (1015 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (611 aa)
BDEG_26471Uncharacterized protein. (313 aa)
BDEG_25816SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (397 aa)
BDEG_26538Fcf2 domain-containing protein. (264 aa)
BDEG_26553Uncharacterized protein. (202 aa)
BDEG_26225NUC153 domain-containing protein. (733 aa)
BDEG_26826DEAD domain-containing protein. (243 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (245 aa)
BDEG_26914Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (131 aa)
BDEG_26470Pre-rRNA-processing protein PNO1. (223 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (432 aa)
BDEG_26338Uncharacterized protein. (457 aa)
BDEG_27013S4 RNA-binding domain-containing protein. (182 aa)
BDEG_26608Uncharacterized protein. (276 aa)
BDEG_26825Uncharacterized protein. (801 aa)
BDEG_27071Uncharacterized protein. (1448 aa)
BDEG_26483Uncharacterized protein. (319 aa)
BDEG_27103ANAPC4_WD40 domain-containing protein. (866 aa)
BDEG_26541Uncharacterized protein. (639 aa)
BDEG_26652Ribosomal protein L11 methyltransferase (PrmA); Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (306 aa)
BDEG_27270Brix domain-containing protein. (635 aa)
BDEG_26920U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (704 aa)
BDEG_27008Uncharacterized protein. (296 aa)
BDEG_27354Uncharacterized protein. (1956 aa)
BDEG_27379HRDC domain-containing protein. (826 aa)
BDEG_27409WD_REPEATS_REGION domain-containing protein. (499 aa)
BDEG_27339Nop domain-containing protein. (502 aa)
BDEG_27561rRNA 2'-O-methyltransferase fibrillarin. (329 aa)
BDEG_27438Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (717 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (739 aa)
BDEG_27681Uncharacterized protein. (117 aa)
BDEG_27950WD_REPEATS_REGION domain-containing protein. (416 aa)
BDEG_27601Uncharacterized protein. (280 aa)
BDEG_28011Ribosomal protein L11 methyltransferase (PrmA); Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (541 aa)
BDEG_27593DRIM domain-containing protein. (2834 aa)
BDEG_28205WD_REPEATS_REGION domain-containing protein. (580 aa)
BDEG_28258PUM-HD domain-containing protein. (784 aa)
BDEG_28262WD_REPEATS_REGION domain-containing protein. (773 aa)
BDEG_27906Uncharacterized protein. (436 aa)
BDEG_28164WD_REPEATS_REGION domain-containing protein. (511 aa)
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
Server load: low (34%) [HD]