STRINGSTRING
BDEG_20155 BDEG_20155 BDEG_20236 BDEG_20236 NAT10 NAT10 BDEG_20725 BDEG_20725 BDEG_20921 BDEG_20921 BDEG_21190 BDEG_21190 BDEG_21533 BDEG_21533 BDEG_23062 BDEG_23062 BDEG_22913 BDEG_22913 BDEG_23517 BDEG_23517 BDEG_22851 BDEG_22851 BDEG_23265 BDEG_23265 BDEG_24264 BDEG_24264 BDEG_24861 BDEG_24861 BDEG_25377 BDEG_25377 BDEG_25229 BDEG_25229 BDEG_25706 BDEG_25706 BDEG_25734 BDEG_25734 BDEG_25435 BDEG_25435 BDEG_26914 BDEG_26914 BDEG_27013 BDEG_27013 BDEG_27103 BDEG_27103 BDEG_26920 BDEG_26920 BDEG_27409 BDEG_27409 BDEG_27339 BDEG_27339 BDEG_27561 BDEG_27561 BDEG_28205 BDEG_28205 BDEG_28262 BDEG_28262
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BDEG_20155Uncharacterized protein. (671 aa)
BDEG_2023618S rRNA biogenesis protein RCL1. (378 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1173 aa)
BDEG_20725Nop domain-containing protein. (515 aa)
BDEG_20921WD_REPEATS_REGION domain-containing protein. (899 aa)
BDEG_21190WD_REPEATS_REGION domain-containing protein. (613 aa)
BDEG_21533Uncharacterized protein. (1123 aa)
BDEG_23062WD_REPEATS_REGION domain-containing protein. (877 aa)
BDEG_22913WD_REPEATS_REGION domain-containing protein. (647 aa)
BDEG_23517NUC153 domain-containing protein. (698 aa)
BDEG_22851U3 small nucleolar RNA-associated protein 22. (1256 aa)
BDEG_23265Uncharacterized protein. (351 aa)
BDEG_24264Uncharacterized protein. (527 aa)
BDEG_24861Uncharacterized protein. (376 aa)
BDEG_25377Brix domain-containing protein. (247 aa)
BDEG_25229Uncharacterized protein. (1115 aa)
BDEG_25706BP28CT domain-containing protein. (2101 aa)
BDEG_25734Uncharacterized protein. (994 aa)
BDEG_25435WD_REPEATS_REGION domain-containing protein. (975 aa)
BDEG_26914Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (131 aa)
BDEG_27013S4 RNA-binding domain-containing protein. (182 aa)
BDEG_27103ANAPC4_WD40 domain-containing protein. (866 aa)
BDEG_26920U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (704 aa)
BDEG_27409WD_REPEATS_REGION domain-containing protein. (499 aa)
BDEG_27339Nop domain-containing protein. (502 aa)
BDEG_27561rRNA 2'-O-methyltransferase fibrillarin. (329 aa)
BDEG_28205WD_REPEATS_REGION domain-containing protein. (580 aa)
BDEG_28262WD_REPEATS_REGION domain-containing protein. (773 aa)
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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