(10 nodes) RNA polymerase II general transcription initiation factor activity network (Batrachochytrium dendrobatidis JEL423)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	BDEG_23074	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (257 aa)
	BDEG_27542	TAF domain-containing protein. (457 aa)
	BDEG_27015	TATA-box-binding protein. (137 aa)
	BDEG_25463	TFIIB-type domain-containing protein. (335 aa)
	BDEG_25004	CBFD_NFYB_HMF domain-containing protein. (154 aa)
	BDEG_23835	Uncharacterized protein. (858 aa)
	BDEG_23022	Bromo domain-containing protein. (1244 aa)
	BDEG_22688	BTB domain-containing protein. (528 aa)
	BDEG_20903	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (786 aa)
	BDEG_20169	BTP domain-containing protein. (288 aa)

Your Current Organism:

Batrachochytrium dendrobatidis JEL423

NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDEG_20169	BDEG_20903	A0A177W784	A0A177W9J5	BTP domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.836
BDEG_20169	BDEG_22688	A0A177W784	A0A177WG92	BTP domain-containing protein.	BTB domain-containing protein.	0.938
BDEG_20169	BDEG_23022	A0A177W784	A0A177WHE6	BTP domain-containing protein.	Bromo domain-containing protein.	0.989
BDEG_20169	BDEG_23074	A0A177W784	A0A177WI76	BTP domain-containing protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.875
BDEG_20169	BDEG_23835	A0A177W784	A0A177WJU4	BTP domain-containing protein.	Uncharacterized protein.	0.938
BDEG_20169	BDEG_25463	A0A177W784	A0A177WQ41	BTP domain-containing protein.	TFIIB-type domain-containing protein.	0.864
BDEG_20169	BDEG_27015	A0A177W784	A0A177WW35	BTP domain-containing protein.	TATA-box-binding protein.	0.993
BDEG_20169	BDEG_27542	A0A177W784	A0A177WXE1	BTP domain-containing protein.	TAF domain-containing protein.	0.999
BDEG_20903	BDEG_20169	A0A177W9J5	A0A177W784	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	BTP domain-containing protein.	0.836
BDEG_20903	BDEG_22688	A0A177W9J5	A0A177WG92	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	BTB domain-containing protein.	0.906
BDEG_20903	BDEG_23022	A0A177W9J5	A0A177WHE6	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Bromo domain-containing protein.	0.947
BDEG_20903	BDEG_23074	A0A177W9J5	A0A177WI76	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.984
BDEG_20903	BDEG_23835	A0A177W9J5	A0A177WJU4	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.906
BDEG_20903	BDEG_25463	A0A177W9J5	A0A177WQ41	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TFIIB-type domain-containing protein.	0.987
BDEG_20903	BDEG_27015	A0A177W9J5	A0A177WW35	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TATA-box-binding protein.	0.960
BDEG_20903	BDEG_27542	A0A177W9J5	A0A177WXE1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	TAF domain-containing protein.	0.857
BDEG_22688	BDEG_20169	A0A177WG92	A0A177W784	BTB domain-containing protein.	BTP domain-containing protein.	0.938
BDEG_22688	BDEG_20903	A0A177WG92	A0A177W9J5	BTB domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.906
BDEG_22688	BDEG_23022	A0A177WG92	A0A177WHE6	BTB domain-containing protein.	Bromo domain-containing protein.	0.945
BDEG_22688	BDEG_23074	A0A177WG92	A0A177WI76	BTB domain-containing protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.906