(15 nodes) Transcription preinitiation complex assembly network (Batrachochytrium dendrobatidis JEL423)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BDEG_20605	TAFII55_N domain-containing protein. (563 aa)
	BDEG_26482	Transcription elongation factor S-II. (282 aa)
	BDEG_20997	CBFD_NFYB_HMF domain-containing protein. (149 aa)
	BDEG_26017	Uncharacterized protein. (508 aa)
	BDEG_25718	Uncharacterized protein. (397 aa)
	BDEG_25463	TFIIB-type domain-containing protein. (335 aa)
	BDEG_25246	TFIIB-type domain-containing protein. (483 aa)
	BDEG_20820	Myb_DNA-bind_7 domain-containing protein. (752 aa)
	BDEG_24903	Uncharacterized protein. (110 aa)
	BDEG_23670	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (106 aa)
	BDEG_23022	Bromo domain-containing protein. (1244 aa)
	BDEG_22710	Uncharacterized protein. (230 aa)
	BDEG_22556	TFIID_20kDa domain-containing protein. (1148 aa)
	BDEG_27594	TAFII28 domain-containing protein. (247 aa)
	BDEG_27930	TFIID_20kDa domain-containing protein. (258 aa)

Your Current Organism:

Batrachochytrium dendrobatidis JEL423

NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDEG_20605	BDEG_22556	A0A177W9Y1	A0A177WEV4	TAFII55_N domain-containing protein.	TFIID_20kDa domain-containing protein.	0.999
BDEG_20605	BDEG_22710	A0A177W9Y1	A0A177WG97	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.998
BDEG_20605	BDEG_23022	A0A177W9Y1	A0A177WHE6	TAFII55_N domain-containing protein.	Bromo domain-containing protein.	0.999
BDEG_20605	BDEG_23670	A0A177W9Y1	A0A177WJA2	TAFII55_N domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.816
BDEG_20605	BDEG_24903	A0A177W9Y1	A0A177WN40	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.999
BDEG_20605	BDEG_25463	A0A177W9Y1	A0A177WQ41	TAFII55_N domain-containing protein.	TFIIB-type domain-containing protein.	0.903
BDEG_20605	BDEG_26482	A0A177W9Y1	A0A177WSK7	TAFII55_N domain-containing protein.	Transcription elongation factor S-II.	0.772
BDEG_20605	BDEG_27594	A0A177W9Y1	A0A177WWM9	TAFII55_N domain-containing protein.	TAFII28 domain-containing protein.	0.998
BDEG_20605	BDEG_27930	A0A177W9Y1	A0A177WXA9	TAFII55_N domain-containing protein.	TFIID_20kDa domain-containing protein.	0.972
BDEG_20820	BDEG_25246	A0A177WAN2	A0A177WPG3	Myb_DNA-bind_7 domain-containing protein.	TFIIB-type domain-containing protein.	0.959
BDEG_20820	BDEG_26017	A0A177WAN2	A0A177WR24	Myb_DNA-bind_7 domain-containing protein.	Uncharacterized protein.	0.959
BDEG_20820	BDEG_26482	A0A177WAN2	A0A177WSK7	Myb_DNA-bind_7 domain-containing protein.	Transcription elongation factor S-II.	0.727
BDEG_20997	BDEG_25463	A0A177W9W3	A0A177WQ41	CBFD_NFYB_HMF domain-containing protein.	TFIIB-type domain-containing protein.	0.563
BDEG_22556	BDEG_20605	A0A177WEV4	A0A177W9Y1	TFIID_20kDa domain-containing protein.	TAFII55_N domain-containing protein.	0.999
BDEG_22556	BDEG_22710	A0A177WEV4	A0A177WG97	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.999
BDEG_22556	BDEG_23022	A0A177WEV4	A0A177WHE6	TFIID_20kDa domain-containing protein.	Bromo domain-containing protein.	0.999
BDEG_22556	BDEG_23670	A0A177WEV4	A0A177WJA2	TFIID_20kDa domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.879
BDEG_22556	BDEG_24903	A0A177WEV4	A0A177WN40	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.999
BDEG_22556	BDEG_25463	A0A177WEV4	A0A177WQ41	TFIID_20kDa domain-containing protein.	TFIIB-type domain-containing protein.	0.918
BDEG_22556	BDEG_26482	A0A177WEV4	A0A177WSK7	TFIID_20kDa domain-containing protein.	Transcription elongation factor S-II.	0.740