(67 nodes) Glycolysis, and Pentose phosphate pathway network (Phytophthora infestans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PITG_00463	Uncharacterized protein. (313 aa)
	PITG_00806	Uncharacterized protein. (249 aa)
	PITG_00075	Uncharacterized protein. (1284 aa)
	PITG_00132	Phosphoglycerate kinase. (428 aa)
	PITG_00146	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (550 aa)
	PITG_01752	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (696 aa)
	PITG_01862	Glucose-6-phosphate isomerase; Belongs to the GPI family. (556 aa)
	PITG_01938	Glyceraldehyde-3-phosphate dehydrogenase. (303 aa)
	PITG_01939	Glyceraldehyde-3-phosphate dehydrogenase. (310 aa)
	PITG_01940	Glyceraldehyde-3-phosphate dehydrogenase. (339 aa)
	PITG_02038	Fructose 1,6 bisphosphatase; Belongs to the FBPase class 1 family. (333 aa)
	PITG_02734	Uncharacterized protein. (128 aa)
	PITG_02735	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, putative. (225 aa)
	PITG_02757	Pyruvate kinase; Belongs to the pyruvate kinase family. (601 aa)
	PITG_02785	Fructose-bisphosphate aldolase. (390 aa)
	PITG_02786	Fructose-bisphosphate aldolase. (358 aa)
	PITG_03598	6-phosphofructokinase, putative. (504 aa)
	PITG_03658	Phosphoglycerate mutase, putative. (531 aa)
	PITG_03698	Enolase. (454 aa)
	PITG_03700	Enolase. (454 aa)
	PITG_03724	Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (900 aa)
	PITG_03992	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (232 aa)
	PITG_03078	Triosephosphate isomerase. (230 aa)
	PITG_03365	Glucokinase, putative. (322 aa)
	PITG_04041	Uncharacterized protein. (124 aa)
	PITG_04665	Ribose-5-phosphate isomerase. (240 aa)
	PITG_05569	Uncharacterized protein. (336 aa)
	PITG_05636	Transaldolase. (334 aa)
	PITG_06448	Pyruvate carboxylase, mitochondrial. (657 aa)
	PITG_05946	Uncharacterized protein. (581 aa)
	PITG_07400	Phosphoglycerate mutase. (260 aa)
	PITG_07405	Pyruvate kinase; Belongs to the pyruvate kinase family. (522 aa)
	PITG_08073	G6PD_C domain-containing protein. (228 aa)
	PITG_08598	6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (244 aa)
	PITG_09310	6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase, putative. (539 aa)
	PITG_09393	Pyruvate kinase; Belongs to the pyruvate kinase family. (466 aa)
	PITG_09394	Pyruvate kinase; Belongs to the pyruvate kinase family. (457 aa)
	PITG_09400	Pyruvate kinase; Belongs to the pyruvate kinase family. (506 aa)
	PITG_09402	Phosphoglycerate kinase. (242 aa)
	PITG_09470	Arabinan endo-1,5-alpha-L-arabinosidase A. (313 aa)
	PITG_09476	Arabinan endo-1,5-alpha-L-arabinosidase A. (299 aa)
	PITG_09923	6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase, putative. (745 aa)
	PITG_10032	6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (489 aa)
	PITG_11065	NAD-dependent malic enzyme, putative. (622 aa)
	PITG_11190	Uncharacterized protein. (448 aa)
	PITG_22934	Lipase, putative. (289 aa)
	PITG_11527	Uncharacterized protein. (268 aa)
	PITG_13116	Triosephosphate isomerase. (250 aa)
	PITG_13749	Phosphoglycerate mutase. (287 aa)
	PITG_14195	Enolase. (457 aa)
	PITG_16047	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	PITG_16048	Triosephosphate isomerase. (280 aa)
	PITG_16057	Enolase-like protein, putative. (570 aa)
	PITG_17130	Glyceraldehyde-3-phosphate dehydrogenase, putative; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (524 aa)
	PITG_17753	Malic enzyme. (538 aa)
	PITG_19493	Glyceraldehyde-3-phosphate dehydrogenase. (293 aa)
	PITG_19495	Glyceraldehyde-3-phosphate dehydrogenase, putative. (74 aa)
	PITG_19961	Glyceraldehyde-3-phosphate dehydrogenase. (164 aa)
	PITG_20261	Uncharacterized protein. (185 aa)
	PITG_20683	Uncharacterized protein. (265 aa)
	PITG_20687	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (232 aa)
	PITG_20970	Glyceraldehyde-3-phosphate dehydrogenase. (326 aa)
	PITG_21153	Ldh_1_N domain-containing protein. (278 aa)
	PITG_21183	Uncharacterized protein. (481 aa)
	PITG_21184	Uncharacterized protein. (389 aa)
	PITG_21697	Phosphoglycerate mutase. (59 aa)
	PITG_22103	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)

Your Current Organism:

Phytophthora infestans

NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PITG_00075	PITG_00132	D0MST9	D0MSY9	Uncharacterized protein.	Phosphoglycerate kinase.	0.574
PITG_00075	PITG_00463	D0MST9	D0MQV7	Uncharacterized protein.	Uncharacterized protein.	0.574
PITG_00075	PITG_00806	D0MST9	D0MRR1	Uncharacterized protein.	Uncharacterized protein.	0.544
PITG_00075	PITG_01862	D0MST9	D0MU98	Uncharacterized protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.845
PITG_00075	PITG_01938	D0MST9	D0MUG3	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.446
PITG_00075	PITG_01939	D0MST9	D0MUG4	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.446
PITG_00075	PITG_01940	D0MST9	D0MUG5	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.446
PITG_00075	PITG_02038	D0MST9	D0MUQ5	Uncharacterized protein.	Fructose 1,6 bisphosphatase; Belongs to the FBPase class 1 family.	0.437
PITG_00075	PITG_02734	D0MST9	D0MX32	Uncharacterized protein.	Uncharacterized protein.	0.544
PITG_00075	PITG_02735	D0MST9	D0MX33	Uncharacterized protein.	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, putative.	0.544
PITG_00075	PITG_02785	D0MST9	D0MX78	Uncharacterized protein.	Fructose-bisphosphate aldolase.	0.492
PITG_00075	PITG_02786	D0MST9	D0MX79	Uncharacterized protein.	Fructose-bisphosphate aldolase.	0.492
PITG_00075	PITG_03078	D0MST9	D0MZB6	Uncharacterized protein.	Triosephosphate isomerase.	0.568
PITG_00075	PITG_03365	D0MST9	D0N026	Uncharacterized protein.	Glucokinase, putative.	0.421
PITG_00075	PITG_03598	D0MST9	D0MY08	Uncharacterized protein.	6-phosphofructokinase, putative.	0.875
PITG_00075	PITG_03698	D0MST9	D0MYA3	Uncharacterized protein.	Enolase.	0.689
PITG_00075	PITG_03700	D0MST9	D0MYA4	Uncharacterized protein.	Enolase.	0.689
PITG_00075	PITG_04041	D0MST9	D0N0E6	Uncharacterized protein.	Uncharacterized protein.	0.689
PITG_00075	PITG_05569	D0MST9	D0N352	Uncharacterized protein.	Uncharacterized protein.	0.689
PITG_00075	PITG_05636	D0MST9	D0N3B2	Uncharacterized protein.	Transaldolase.	0.441