(67 nodes) Protein deubiquitination network (Phytophthora infestans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PITG_10931	OTU domain-containing protein. (554 aa)
	PITG_10529	Uncharacterized protein. (450 aa)
	PITG_10235	Uncharacterized protein. (99 aa)
	PITG_10119	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (1492 aa)
	PITG_09968	DUF4205 domain-containing protein. (534 aa)
	PITG_08883	Josephin domain-containing protein. (153 aa)
	PITG_08676	26S proteasome non-ATPase regulatory subunit 14, putative. (311 aa)
	PITG_09508	Ubiquitin carboxyl-terminal hydrolase. (316 aa)
	PITG_08488	Uncharacterized protein. (110 aa)
	PITG_08484	Uncharacterized protein. (105 aa)
	PITG_07669	Uncharacterized protein. (753 aa)
	PITG_07656	Ubiquitin carboxyl-terminal hydrolase. (901 aa)
	PITG_07236	Myb-like domain-containing protein. (570 aa)
	PITG_07083	Ubiquitin thioesterase OTU1-like protein. (281 aa)
	PITG_06832	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (1769 aa)
	PITG_06282	Ubiquitin carboxyl-terminal hydrolase. (382 aa)
	PITG_06274	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (620 aa)
	PITG_05600	Metalloprotease family M67C, putative. (411 aa)
	PITG_05523	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (878 aa)
	PITG_03276	U4/U6.U5 tri-snRNP-associated protein, putative. (493 aa)
	PITG_03897	MYND-type domain-containing protein. (175 aa)
	PITG_03753	Ubiquitin carboxyl-terminal hydrolase and/or F-box protein, putative. (730 aa)
	PITG_02661	Ubiquitin-like domain-containing protein. (684 aa)
	PITG_02561	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (2622 aa)
	PITG_02546	Ubiquitin carboxyl-terminal hydrolase. (854 aa)
	PITG_19472	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (2558 aa)
	PITG_01920	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (1573 aa)
	PITG_01453	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (2859 aa)
	PITG_00077	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (1511 aa)
	PITG_01104	Ubiquitin thioesterase otubain. (200 aa)
	PITG_22427	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (258 aa)
	PITG_20160	Uncharacterized protein. (631 aa)
	PITG_01314	Ubiquitin carboxyl-terminal hydrolase. (461 aa)
	PITG_19471	Uncharacterized protein. (159 aa)
	PITG_19268	DUSP domain-containing protein. (394 aa)
	PITG_18359	Ubiquitin carboxyl-terminal hydrolase. (770 aa)
	PITG_18250	DUSP domain-containing protein. (310 aa)
	PITG_18249	Uncharacterized protein. (660 aa)
	PITG_17488	Uncharacterized protein. (146 aa)
	PITG_17487	Uncharacterized protein. (121 aa)
	PITG_17791	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (2442 aa)
	PITG_16722	Metalloprotease family M67A, putative. (235 aa)
	PITG_16721	PWWP domain-containing protein. (255 aa)
	PITG_15600	Uncharacterized protein. (435 aa)
	PITG_15599	Uncharacterized protein. (593 aa)
	PITG_15563	Uncharacterized protein. (207 aa)
	PITG_15555	Uncharacterized protein. (164 aa)
	PITG_14637	MYND-type domain-containing protein. (561 aa)
	PITG_15328	Transmembrane protein, putative. (323 aa)
	PITG_15295	Uncharacterized protein. (211 aa)
	PITG_15293	Uncharacterized protein. (616 aa)
	PITG_15284	Uncharacterized protein. (485 aa)
	PITG_23018	Uncharacterized protein. (365 aa)
	PITG_23017	Uncharacterized protein. (242 aa)
	PITG_14437	Uncharacterized protein. (220 aa)
	PITG_14251	OTU domain-containing protein. (608 aa)
	PITG_14225	OTU domain-containing protein. (426 aa)
	PITG_14224	OTU domain-containing protein. (250 aa)
	PITG_13502	Uncharacterized protein. (195 aa)
	PITG_12764	Ubiquitin carboxyl-terminal hydrolase. (739 aa)
	PITG_11431	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (1100 aa)
	PITG_11919	Ubiquitin carboxyl-terminal hydrolase. (563 aa)
	PITG_10885	Uncharacterized protein. (411 aa)
	PITG_10821	Ubiquitin carboxyl-terminal hydrolase. (470 aa)
	PITG_10795	Uncharacterized protein. (626 aa)
	PITG_11273	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family. (1331 aa)
	PITG_11090	OTU domain-containing protein. (291 aa)

Your Current Organism:

Phytophthora infestans

NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PITG_00077	PITG_06274	D0MSU1	D0N4H4	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family.	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family.	0.451
PITG_01104	PITG_01314	D0MSG8	D0MV75	Ubiquitin thioesterase otubain.	Ubiquitin carboxyl-terminal hydrolase.	0.630
PITG_01104	PITG_02546	D0MSG8	D0MWL4	Ubiquitin thioesterase otubain.	Ubiquitin carboxyl-terminal hydrolase.	0.522
PITG_01104	PITG_07083	D0MSG8	D0N781	Ubiquitin thioesterase otubain.	Ubiquitin thioesterase OTU1-like protein.	0.509
PITG_01104	PITG_08883	D0MSG8	D0NDE9	Ubiquitin thioesterase otubain.	Josephin domain-containing protein.	0.400
PITG_01104	PITG_11090	D0MSG8	D0NG56	Ubiquitin thioesterase otubain.	OTU domain-containing protein.	0.454
PITG_01104	PITG_11919	D0MSG8	D0NHJ1	Ubiquitin thioesterase otubain.	Ubiquitin carboxyl-terminal hydrolase.	0.630
PITG_01314	PITG_01104	D0MV75	D0MSG8	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin thioesterase otubain.	0.630
PITG_01314	PITG_01920	D0MV75	D0MUE6	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family.	0.415
PITG_01314	PITG_02546	D0MV75	D0MWL4	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin carboxyl-terminal hydrolase.	0.409
PITG_01314	PITG_02561	D0MV75	D0MWM8	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family.	0.563
PITG_01314	PITG_03753	D0MV75	D0MYF2	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin carboxyl-terminal hydrolase and/or F-box protein, putative.	0.415
PITG_01314	PITG_05600	D0MV75	D0N380	Ubiquitin carboxyl-terminal hydrolase.	Metalloprotease family M67C, putative.	0.521
PITG_01314	PITG_07083	D0MV75	D0N781	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin thioesterase OTU1-like protein.	0.417
PITG_01314	PITG_11090	D0MV75	D0NG56	Ubiquitin carboxyl-terminal hydrolase.	OTU domain-containing protein.	0.476
PITG_01314	PITG_11273	D0MV75	D0NGM2	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family.	0.415
PITG_01314	PITG_18359	D0MV75	D0NXZ3	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin carboxyl-terminal hydrolase.	0.478
PITG_01920	PITG_01314	D0MUE6	D0MV75	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family.	Ubiquitin carboxyl-terminal hydrolase.	0.415
PITG_01920	PITG_02546	D0MUE6	D0MWL4	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family.	Ubiquitin carboxyl-terminal hydrolase.	0.694
PITG_01920	PITG_06274	D0MUE6	D0N4H4	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family.	Ubiquitin-specific protease, putative; Belongs to the peptidase C19 family.	0.401