STRINGSTRING
Gbem_0226 Gbem_0226 pyc pyc ppdK ppdK pckA pckA fumB fumB pyk pyk maeB-1 maeB-1 oadA oadA maeB-2 maeB-2 maeB-3 maeB-3 mdh mdh Gbem_3555 Gbem_3555
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
Predicted Interactions
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gene fusions
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co-expression
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Your Input:
Gbem_0226Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (911 aa)
pycPyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1148 aa)
ppdKPyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (914 aa)
pckAPhosphoenolpyruvate carboxykinase, GTP-dependent; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (647 aa)
fumBFumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (541 aa)
pykPyruvate kinase; Belongs to the pyruvate kinase family. (481 aa)
maeB-1Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing. (749 aa)
oadAOxaloacetate decarboxylase. (690 aa)
maeB-2Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing. (779 aa)
maeB-3Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing. (749 aa)
mdhMalate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (317 aa)
Gbem_3555Cyclase/hydrolase, putative. (226 aa)
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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