STRINGSTRING
Gbem_3667 Gbem_3667 hdrA hdrA Gbem_0636 Gbem_0636 bamE bamE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Gbem_3667Cytochrome c; 8 heme-binding sites. (407 aa)
hdrAHeterodisulfide oxidoreductase, FAD-binding and iron-sulfur cluster-binding subunit A. (665 aa)
Gbem_0636Protein of unknown function DUF116. (256 aa)
bamEPolyferredoxin, putative benzoyl-CoA reductase electron transfer protein. (1012 aa)
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
Server load: low (12%) [HD]