STRINGSTRING
bamG bamG macA macA coxA coxA coxC coxC coxD coxD coxB coxB cooL/cooX cooL/cooX cooU cooU cooH cooH cooF cooF cbcY cbcY actE actE ccoP ccoP ccoN ccoN actA actA Gbem_0145 Gbem_0145 nuoN-2 nuoN-2 nuoM-2 nuoM-2 nuoL-2 nuoL-2 nuoK-2 nuoK-2 nuoJ-2 nuoJ-2 nuoF-2 nuoF-2 nuoE-2 nuoE-2 nuoBCD nuoBCD nuoA-2 nuoA-2 roo roo por-1 por-1 Gbem_0285 Gbem_0285 Gbem_0301 Gbem_0301 Gbem_0312 Gbem_0312 Gbem_0632 Gbem_0632 sfrA sfrA cbcB cbcB Gbem_0735 Gbem_0735 Gbem_0784 Gbem_0784 cccA cccA cbcX cbcX cbcW cbcW cbcV cbcV frx-6 frx-6 Gbem_1157 Gbem_1157 frx-4 frx-4 Gbem_1211 Gbem_1211 Gbem_1234 Gbem_1234 Gbem_1236 Gbem_1236 Gbem_1237 Gbem_1237 Gbem_1248 Gbem_1248 Gbem_1249 Gbem_1249 cydA-1 cydA-1 cydB-1 cydB-1 etfB-5 etfB-5 etfA-5 etfA-5 aorA aorA etfB-1 etfB-1 etfA-1 etfA-1 frx-5 frx-5 hycB hycB hycL hycL hycS hycS iorA-2 iorA-2 iorB-2 iorB-2 bamB-1 bamB-1 bamI bamI etfB-2 etfB-2 etfA-2 etfA-2 Gbem_1469 Gbem_1469 Gbem_1470 Gbem_1470 etfB-3 etfB-3 etfA-3 etfA-3 fdnI-2 fdnI-2 fdnG-2 fdnG-2 Gbem_1585 Gbem_1585 mnhD mnhD Gbem_1881 Gbem_1881 hyhL hyhL cydA-2 cydA-2 cydB-2 cydB-2 etfB-6 etfB-6 etfA-6 etfA-6 Gbem_2111 Gbem_2111 Gbem_2175 Gbem_2175 fdnG-3 fdnG-3 Gbem_2183 Gbem_2183 iorB-1 iorB-1 iorA-1 iorA-1 fdnG-1 fdnG-1 frx-2 frx-2 Gbem_2476 Gbem_2476 azoR azoR bamB-2 bamB-2 Gbem_2731 Gbem_2731 etfA-7 etfA-7 etfB-7 etfB-7 Gbem_2884 Gbem_2884 korC korC korB korB vorC vorC vorB vorB hybL hybL hybS hybS ehrS ehrS ehrL ehrL ehrD ehrD ehrC ehrC ehrB ehrB ehrA-1 ehrA-1 ehrA-2 ehrA-2 Gbem_3199 Gbem_3199 frdB frdB frdA frdA Gbem_3336 Gbem_3336 Gbem_3341 Gbem_3341 Gbem_3379 Gbem_3379 Gbem_3409 Gbem_3409 ppcG ppcG Gbem_3529 Gbem_3529 Gbem_3597 Gbem_3597 Gbem_3607 Gbem_3607 Gbem_3773 Gbem_3773 mvhL mvhL norZ norZ nuoN-1 nuoN-1 nuoM-1 nuoM-1 nuoL-1 nuoL-1 nuoK-1 nuoK-1 nuoJ-1 nuoJ-1 nuoG-1 nuoG-1 nuoE-1 nuoE-1 nuoD nuoD nuoC nuoC nuoB nuoB nuoA-1 nuoA-1 cbcR cbcR cbcQ cbcQ cbcP cbcP cbcO cbcO por-2 por-2 Gbem_4036 Gbem_4036 ppcD ppcD ppcB ppcB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bamGbenzoyl-CoA reductase electron transfer protein, putative. (152 aa)
macACytochrome c peroxidase; 2 heme-binding sites. (345 aa)
coxACytochrome c oxidase, coo3-type, cytochrome o subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (539 aa)
coxCCytochrome c oxidase, coo3-type, subunit III. (199 aa)
coxDCytochrome c oxidase, coo3-type, subunit IV. (93 aa)
coxBCytochrome c oxidase, coo3-type, cytochrome c subunit II, one heme-binding site; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (301 aa)
cooL/cooXHydrogenase subunit, iron-sulfur cluster-binding domain-containing. (332 aa)
cooUCarbon monoxide-induced hydrogenase, CooU subunit. (175 aa)
cooHCarbon monoxide-induced hydrogenase, large subunit. (359 aa)
cooFCarbon monoxide dehydrogenase-associated iron-sulfur cluster-binding oxidoreductase CooF. (189 aa)
cbcYCytochrome c, and cytochrome b; 9 heme-binding sites. (616 aa)
actEMenaquinol oxidoreductase complex ACIII, cytochrome c subunit ActE, 1 heme-binding site. (166 aa)
ccoPCytochrome c oxidase, cbb3-type, diheme subunit. (339 aa)
ccoNCytochrome c oxidase, cbb3-type, subunit I. (463 aa)
actAMenaquinol oxidoreductase complex ACIII, cytochrome c subunit ActA; 5 heme-binding sites. (183 aa)
Gbem_0145Hypothetical protein. (187 aa)
nuoN-2NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (464 aa)
nuoM-2NADH dehydrogenase I, M subunit. (494 aa)
nuoL-2NADH dehydrogenase I, L subunit. (623 aa)
nuoK-2NADH dehydrogenase I, K subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
nuoJ-2NADH dehydrogenase I, J subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (160 aa)
nuoF-2NADH dehydrogenase I, F subunit. (421 aa)
nuoE-2NADH dehydrogenase I, E subunit. (156 aa)
nuoBCDNADH dehydrogenase I, B/C/D subunits; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 20 kDa subunit family. In the C-terminal section; belongs to the complex I 49 [...] (794 aa)
nuoA-2NADH dehydrogenase I, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (134 aa)
rooRubredoxin:oxygen/nitric oxide oxidoreductase. (395 aa)
por-1Pyruvate:ferredoxin/flavodoxin oxidoreductase. (1183 aa)
Gbem_0285Iron-sulfur cluster-binding oxidoreductase. (368 aa)
Gbem_0301Flavodoxin, putative. (211 aa)
Gbem_0312Aldehyde:ferredoxin oxidoreductase, tungsten-containing. (600 aa)
Gbem_0632Hypothetical protein. (201 aa)
sfrANADPH oxidoreductase, alpha subunit. (822 aa)
cbcBMenaquinol oxidoreductase complex Cbc5, cytochrome b subunit, putative. (244 aa)
Gbem_0735Rubredoxin. (52 aa)
Gbem_0784Flavodoxin, putative. (179 aa)
cccACytochrome c catalase; 2 heme-binding sites. (513 aa)
cbcXMenaquinol oxidoreductase complex Cbc3, cytochrome c subunit, putative; 5 heme-binding sites. (266 aa)
cbcWMenaquinol oxidoreductase complex Cbc3, cytochrome b subunit, putative; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (367 aa)
cbcVMenaquinol oxidoreductase complex Cbc3, iron-sulfur cluster-binding subunit, putative. (139 aa)
frx-6Ferredoxin. (64 aa)
Gbem_1157Cytochrome c; 12 heme-binding sites. (818 aa)
frx-4Ferredoxin. (62 aa)
Gbem_1211Lipoprotein cytochrome c, 1 heme-binding site. (121 aa)
Gbem_1234Cytochrome c, 1 heme-binding site. (163 aa)
Gbem_1236Cytochrome c oxidase, cbb3-type, subunit II. (286 aa)
Gbem_1237Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (467 aa)
Gbem_1248Heme-copper oxidase subunit I superfamily protein. (457 aa)
Gbem_1249Cytochrome c; 2 heme-binding sites. (238 aa)
cydA-1Cytochrome bd menaquinol oxidase, subunit I. (447 aa)
cydB-1Cytochrome bd menaquinol oxidase, subunit II. (342 aa)
etfB-5Electron transfer flavoprotein, beta subunit. (258 aa)
etfA-5Electron transfer flavoprotein, alpha subunit. (303 aa)
aorAAldehyde:ferredoxin oxidoreductase, tungsten-containing. (576 aa)
etfB-1Electron transfer flavoprotein, beta subunit. (270 aa)
etfA-1Electron transfer flavoprotein, alpha subunit. (452 aa)
frx-5Ferredoxin. (63 aa)
hycBPeriplasmically oriented, membrane-bound [NiFe]-hydrogenase, cytochrome b subunit. (390 aa)
hycLPeriplasmically oriented, membrane-bound [NiFe]-hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (571 aa)
hycSPeriplasmically oriented, membrane-bound [NiFe]-hydrogenase, small subunit. (391 aa)
iorA-2Indolepyruvate:ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (589 aa)
iorB-2Indolepyruvate:ferredoxin oxidoreductase, beta subunit. (191 aa)
bamB-1benzoyl-CoA reductase, putative. (672 aa)
bamIIron-sulfur cluster-binding protein, putative. (212 aa)
etfB-2Electron transfer flavoprotein, beta subunit. (270 aa)
etfA-2Electron transfer flavoprotein, alpha subunit. (447 aa)
Gbem_1469Electron transfer flavoprotein, beta subunit. (258 aa)
Gbem_1470Electron transfer flavoprotein, alpha subunit. (302 aa)
etfB-3Electron transfer flavoprotein, beta subunit. (270 aa)
etfA-3Electron transfer flavoprotein, alpha subunit. (442 aa)
fdnI-2Periplasmically oriented, membrane-bound formate dehydrogenase, cytochrome b subunit. (204 aa)
fdnG-2Periplasmically oriented, membrane-bound formate dehydrogenase, major subunit, selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1059 aa)
Gbem_1585Lipoprotein cytochrome c, 1 heme-binding site. (134 aa)
mnhDMonovalent cation/proton antiporter, MnhD subunit, putative. (602 aa)
Gbem_1881Lipoprotein cytochrome c; 6 heme-binding sites. (510 aa)
hyhLCytoplasmic [NiFe]-hydrogenase, large subunit. (423 aa)
cydA-2Cytochrome bd menaquinol oxidase, subunit I. (441 aa)
cydB-2Cytochrome bd menaquinol oxidase, subunit II. (347 aa)
etfB-6Electron transfer flavoprotein, beta subunit. (270 aa)
etfA-6Electron transfer flavoprotein, alpha subunit. (436 aa)
Gbem_2111Rubredoxin. (62 aa)
Gbem_2175Rubredoxin. (52 aa)
fdnG-3Cytoplasmic formate dehydrogenase, major subunit, selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1088 aa)
Gbem_2183Cytochrome c, 1 heme-binding site. (110 aa)
iorB-1Indolepyruvate:ferredoxin oxidoreductase, beta subunit. (193 aa)
iorA-1Indolepyruvate:ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (584 aa)
fdnG-1Formate dehydrogenase-N, alpha subunit; Periplasmically oriented, membrane-bound formate dehydrogenase, major subunit, selenocysteine-containing. (1009 aa)
frx-2Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (55 aa)
Gbem_2476Flavodoxin, putative. (214 aa)
azoRFMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. (210 aa)
bamB-2benzoyl-CoA reductase, putative. (656 aa)
Gbem_2731Cytochrome c, 1 heme-binding site. (156 aa)
etfA-7Electron transfer flavoprotein, alpha subunit. (305 aa)
etfB-7Electron transfer flavoprotein, beta subunit. (260 aa)
Gbem_2884Cytochrome c; 7 heme-binding sites. (1017 aa)
korC2-oxoglutarate:ferredoxin oxidoreductase, gamma subunit. (182 aa)
korB2-oxoglutarate:ferredoxin oxidoreductase, thiamin diphosphate-binding subunit. (270 aa)
vorC2-oxoacid:ferredoxin oxidoreductase, gamma subunit. (183 aa)
vorB2-oxoacid:ferredoxin oxidoreductase, thiamin diphosphate-binding subunit. (246 aa)
hybLPeriplasmically oriented, membrane-bound [NiFe]-hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (559 aa)
hybSPeriplasmically oriented, membrane-bound [NiFe]-hydrogenase, small subunit. (368 aa)
ehrSEch-hydrogenase-related complex, small subunit. (252 aa)
ehrLEch-hydrogenase-related complex, large subunit. (503 aa)
ehrDEch-hydrogenase-related complex, HyfF-like integral membrane subunit. (477 aa)
ehrCEch-hydrogenase-related complex, HyfE-like integral membrane subunit. (213 aa)
ehrBEch-hydrogenase-related complex, NuoH-like integral membrane subunit. (302 aa)
ehrA-1Ech-hydrogenase-related complex, NuoL-like integral membrane subunit. (659 aa)
ehrA-2Ech-hydrogenase-related complex, NuoL-like integral membrane subunit. (666 aa)
Gbem_3199Cytochrome c; 7 heme-binding sites. (507 aa)
frdBSuccinate dehydrogenase/fumarate reductase, iron-sulfur protein. (246 aa)
frdASuccinate dehydrogenase/fumarate reductase, flavoprotein subunit. (637 aa)
Gbem_3336Lipoprotein cytochrome c, 1 heme-binding site. (117 aa)
Gbem_3341Aldehyde:ferredoxin oxidoreductase, tungsten-containing. (579 aa)
Gbem_3379Lipoprotein cytochrome c; 12 heme-binding sites. (789 aa)
Gbem_3409IPT/TIG domain protein. (297 aa)
ppcGCytochrome c; 3 heme-binding sites. (89 aa)
Gbem_3529Hypothetical protein. (186 aa)
Gbem_3597Flavocytochrome c; 4 heme-binding sites; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (591 aa)
Gbem_3607Flavodoxin, putative. (156 aa)
Gbem_3773Flavodoxin, putative. (220 aa)
mvhLMethyl viologen-reducing hydrogenase, large subunit. (473 aa)
norZNitric oxide reductase, cytochrome b. (763 aa)
nuoN-1NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (484 aa)
nuoM-1NADH dehydrogenase I, M subunit. (535 aa)
nuoL-1NADH dehydrogenase I, L subunit. (667 aa)
nuoK-1NADH dehydrogenase I, K subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (100 aa)
nuoJ-1NADH dehydrogenase I, J subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (167 aa)
nuoG-1NADH dehydrogenase I, G subunit; Belongs to the complex I 75 kDa subunit family. (821 aa)
nuoE-1NADH dehydrogenase I, E subunit. (169 aa)
nuoDNADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (389 aa)
nuoCNADH dehydrogenase I, C subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (161 aa)
nuoBNADH dehydrogenase I, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (170 aa)
nuoA-1NADH dehydrogenase I, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (118 aa)
cbcRMenaquinol oxidoreductase complex Cbc6, cytochrome c subunit, putative; 4 heme-binding sites. (274 aa)
cbcQMenaquinol oxidoreductase complex Cbc6, membrane protein subunit, putative. (138 aa)
cbcPMenaquinol oxidoreductase complex Cbc6, cytochrome b subunit, putative. (206 aa)
cbcOMenaquinol oxidoreductase complex Cbc6, iron-sulfur cluster-binding subunit, putative. (130 aa)
por-2Pyruvate:ferredoxin/flavodoxin oxidoreductase. (1238 aa)
Gbem_4036Flavocytochrome c; 4 heme-binding sites; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (598 aa)
ppcDCytochrome c; 3 heme-binding sites. (94 aa)
ppcBCytochrome c; 3 heme-binding sites. (90 aa)
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
Server load: low (12%) [HD]