(4 nodes) 3-hydroxyacyl-CoA dehydrogenase, C-terminal network (Geobacter bemidjiensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Gbem_1417	3-hydroxyacyl-CoA dehydrogenase. (288 aa)
	Gbem_1461	3-hydroxyacyl-CoA dehydrogenase. (282 aa)
	Gbem_2126	enoyl-CoA hydratase and 3-hydroxyacyl-CoA dehydrogenase. (789 aa)
	Gbem_2834	3-hydroxyacyl-CoA dehydrogenase. (281 aa)

Your Current Organism:

Geobacter bemidjiensis

NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Gbem_1417	Gbem_1461	3-hydroxyacyl-CoA dehydrogenase.	3-hydroxyacyl-CoA dehydrogenase.	0.908
Gbem_1417	Gbem_2834	3-hydroxyacyl-CoA dehydrogenase.	3-hydroxyacyl-CoA dehydrogenase.	0.907
Gbem_1461	Gbem_1417	3-hydroxyacyl-CoA dehydrogenase.	3-hydroxyacyl-CoA dehydrogenase.	0.908
Gbem_1461	Gbem_2126	3-hydroxyacyl-CoA dehydrogenase.	enoyl-CoA hydratase and 3-hydroxyacyl-CoA dehydrogenase.	0.683
Gbem_1461	Gbem_2834	3-hydroxyacyl-CoA dehydrogenase.	3-hydroxyacyl-CoA dehydrogenase.	0.901
Gbem_2126	Gbem_1461	enoyl-CoA hydratase and 3-hydroxyacyl-CoA dehydrogenase.	3-hydroxyacyl-CoA dehydrogenase.	0.683
Gbem_2834	Gbem_1417	3-hydroxyacyl-CoA dehydrogenase.	3-hydroxyacyl-CoA dehydrogenase.	0.907
Gbem_2834	Gbem_1461	3-hydroxyacyl-CoA dehydrogenase.	3-hydroxyacyl-CoA dehydrogenase.	0.901