STRINGSTRING
gpsA gpsA tdh tdh Gbem_0138 Gbem_0138 fdh fdh acuI acuI gdhA gdhA sucD-1 sucD-1 Gbem_0291 Gbem_0291 ghr ghr Gbem_0374 Gbem_0374 mtd mtd cysG cysG hemA hemA Gbem_0505 Gbem_0505 Gbem_0506 Gbem_0506 panE-1 panE-1 Gbem_0802 Gbem_0802 ddhB ddhB prt prt tyv tyv uge uge fcl-1 fcl-1 asd-2 asd-2 asd-1 asd-1 argC argC Gbem_1065 Gbem_1065 fcl-2 fcl-2 gmd gmd Gbem_1174 Gbem_1174 ald ald Gbem_1191 Gbem_1191 Gbem_1199 Gbem_1199 maeB-1 maeB-1 ahcY ahcY Gbem_1414 Gbem_1414 Gbem_1417 Gbem_1417 panE-2 panE-2 bamQ bamQ fabG-3 fabG-3 maeB-2 maeB-2 Gbem_1461 Gbem_1461 sucD-2 sucD-2 folD-2 folD-2 wbjB wbjB wbjC wbjC Gbem_1625 Gbem_1625 Gbem_1633 Gbem_1633 hprA hprA Gbem_1683 Gbem_1683 Gbem_1684 Gbem_1684 Gbem_1686 Gbem_1686 capL-1 capL-1 capL-2 capL-2 maeB-3 maeB-3 serA serA Gbem_1966 Gbem_1966 Gbem_2099 Gbem_2099 Gbem_2105 Gbem_2105 Gbem_2126 Gbem_2126 Gbem_2147 Gbem_2147 Gbem_2236 Gbem_2236 Gbem_2261 Gbem_2261 uxs uxs ugd ugd Gbem_2308 Gbem_2308 gapA gapA Gbem_2361 Gbem_2361 Gbem_2493 Gbem_2493 aroE aroE dxr dxr ilvC ilvC Gbem_2777 Gbem_2777 fabI fabI Gbem_2834 Gbem_2834 Gbem_2877 Gbem_2877 mdh mdh Gbem_2918 Gbem_2918 folD-1 folD-1 Gbem_2959 Gbem_2959 arnA arnA hom hom Gbem_3062 Gbem_3062 fabG-2 fabG-2 Gbem_3121 Gbem_3121 Gbem_3158 Gbem_3158 galE galE sucD-3 sucD-3 tyrA tyrA Gbem_3311 Gbem_3311 rmlD rmlD rmlB rmlB hpnA hpnA proC proC Gbem_3561 Gbem_3561 Gbem_3722 Gbem_3722 Gbem_3725 Gbem_3725 Gbem_3733 Gbem_3733 gapB gapB Gbem_3794 Gbem_3794 Gbem_4020 Gbem_4020 dapB dapB
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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gene neighborhood
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gpsAGlycerol-3-phosphate dehydrogenase, NAD(P)-dependent; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (335 aa)
tdhL-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. (347 aa)
Gbem_0138Oxidoreductase, short-chain dehydrogenase/reductase family. (286 aa)
fdhFormaldehyde dehydrogenase, glutathione-dependent. (401 aa)
acuINADP-dependent menaquinol:acrylyl-CoA oxidoreductase. (334 aa)
gdhAGlutamate dehydrogenase, NADP-dependent; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (449 aa)
sucD-1succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (298 aa)
Gbem_0291Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (334 aa)
ghrGlyoxalate/3-oxopropanoate/4-oxobutanoate reductase. (287 aa)
Gbem_0374SDR_a2 family oxidoreductase, putative. (310 aa)
mtdMannitol dehydrogenase. (352 aa)
cysGPrecorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase, putative. (224 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (434 aa)
Gbem_0505Monovalent cation/proton antiporter family protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (584 aa)
Gbem_0506Zinc-dependent oxidoreductase. (317 aa)
panE-12-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (307 aa)
Gbem_0802Glycosyltransferase, AmsE-like family. (338 aa)
ddhBCDP-glucose 4,6-dehydratase. (370 aa)
prtCDP-paratose synthase. (303 aa)
tyvCDP-paratose 2-epimerase. (342 aa)
ugeUDP-galacturonate 4-epimerase. (336 aa)
fcl-1GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (309 aa)
asd-2Aspartate-4-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (365 aa)
asd-1Aspartate-4-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (339 aa)
argCN-acetyl-glutamyl-5-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (346 aa)
Gbem_1065NAD(P)-dependent oxidoreductase. (341 aa)
fcl-2GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (324 aa)
gmdGDP-mannose 4,6-dehydratase and GDP-6-deoxy-D-lyxo-4-hexulose reductase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (379 aa)
Gbem_1174Formaldehyde dehydrogenase-related protein, glutathione-dependent. (410 aa)
aldAlanine dehydrogenase; Belongs to the AlaDH/PNT family. (371 aa)
Gbem_1191NADPH:quinone oxidoreductase family protein. (323 aa)
Gbem_1199NADP oxidoreductase, coenzyme F420-dependent. (212 aa)
maeB-1Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing. (749 aa)
ahcYS-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. (465 aa)
Gbem_1414acyl-CoA synthetase, ADP-forming. (697 aa)
Gbem_14173-hydroxyacyl-CoA dehydrogenase. (288 aa)
panE-22-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (322 aa)
bamQ6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. (357 aa)
fabG-33-oxoacyl-(acyl carrier protein) reductase. (237 aa)
maeB-2Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing. (779 aa)
Gbem_14613-hydroxyacyl-CoA dehydrogenase. (282 aa)
sucD-2succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (308 aa)
folD-25,10-methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (281 aa)
wbjBUDP-N-acetylglucosamine 4,6-dehydratase and UDP-2-acetamido-2,6-dideoxy-alpha-D-xylo-4-hexulose 5-epimerase. (338 aa)
wbjCUDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase; UDP-2-acetamido-2, 6-dideoxy-beta-L-arabino-4-hexulose 3-epimerase and UDP-2-acetamido-2,6-dideoxy-beta-L-lyxo-4-hexulose 4-reductase. (374 aa)
Gbem_1625NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase. (323 aa)
Gbem_1633NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase. (647 aa)
hprAHydroxypyruvate reductase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (321 aa)
Gbem_1683NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase. (373 aa)
Gbem_1684NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase. (684 aa)
Gbem_1686NAD(P)-dependent oxidoreductase. (333 aa)
capL-1UDP-N-acetyl-D-galactosamine 6-dehydrogenase, putative; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (428 aa)
capL-2UDP-N-acetyl-D-galactosamine 6-dehydrogenase, putative; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (449 aa)
maeB-3Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing. (749 aa)
serAD-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (532 aa)
Gbem_1966NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase. (281 aa)
Gbem_20993-beta-hydroxysteroid dehydrogenase/isomerase family protein. (330 aa)
Gbem_2105Polyketide synthase. (2477 aa)
Gbem_2126enoyl-CoA hydratase and 3-hydroxyacyl-CoA dehydrogenase. (789 aa)
Gbem_2147Oxidoreductase, short-chain dehydrogenase/reductase family. (253 aa)
Gbem_2236Kef-type potassium transporter, NAD-binding protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (666 aa)
Gbem_2261Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (254 aa)
uxsUDP-glucuronate decarboxylase. (311 aa)
ugdUDP-glucose 6-dehydrogenase. (450 aa)
Gbem_2308Glyoxalate/3-oxopropanoate/4-oxobutanoate reductase-related protein. (285 aa)
gapAGlyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (331 aa)
Gbem_2361Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (243 aa)
Gbem_2493Oxidoreductase, short-chain dehydrogenase/reductase family. (200 aa)
aroEShikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (290 aa)
dxr1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (385 aa)
ilvCKetol-acid reductoisomerase, class II; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (490 aa)
Gbem_2777Glu/Leu/Phe/Val dehydrogenase superfamily protein. (986 aa)
fabIEnoyl-(acyl carrier protein) reductase. (256 aa)
Gbem_28343-hydroxyacyl-CoA dehydrogenase. (281 aa)
Gbem_2877NmrA-like family protein. (285 aa)
mdhMalate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (317 aa)
Gbem_2918Carboxynorspermidine/carboxyspermidine dehydrogenase. (398 aa)
folD-15,10-methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (290 aa)
Gbem_2959Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (305 aa)
arnAUDP-glucuronate 4-dehydrogenase, decarboxylating. (346 aa)
homHomoserine dehydrogenase. (436 aa)
Gbem_3062Hypothetical protein. (245 aa)
fabG-23-oxoacyl-(acyl carrier protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)
Gbem_3121Rossmann fold nucleotide-binding protein. (134 aa)
Gbem_3158Protein of unknown function DUF2520. (292 aa)
galEUDP-glucose/UDP-N-acetylglucosamine 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (329 aa)
sucD-3succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
tyrAPrephenate dehydrogenase. (286 aa)
Gbem_3311NADPH:quinone oxidoreductase family protein PIG3. (329 aa)
rmlDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (278 aa)
rmlBdTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (355 aa)
hpnANAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase. (329 aa)
proCDelta-1-pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (267 aa)
Gbem_3561NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase. (295 aa)
Gbem_3722NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase. (327 aa)
Gbem_3725NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase. (288 aa)
Gbem_3733Oxidoreductase domain protein. (343 aa)
gapBGlyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (480 aa)
Gbem_3794TrkA domain protein. (350 aa)
Gbem_4020Glycoside hydrolase and dTDP-4-dehydrorhamnose reductase, putative; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (730 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (267 aa)
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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