STRINGSTRING
Gbem_0302 Gbem_0302 Gbem_1082 Gbem_1082 Gbem_1353 Gbem_1353 Gbem_1415 Gbem_1415 bamN bamN Gbem_2125 Gbem_2125 Gbem_2126 Gbem_2126 Gbem_2127 Gbem_2127 Gbem_2216 Gbem_2216 Gbem_2832 Gbem_2832 Gbem_2835 Gbem_2835 Gbem_3574 Gbem_3574 Gbem_3877 Gbem_3877
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Gbem_0302[acyl-]glycerolphosphate acyltransferase and acyl-(acyl carrier protein) ligase, major facilitator superfamily domain-containing. (1124 aa)
Gbem_1082acyl-CoA synthetase, AMP-forming. (526 aa)
Gbem_1353Ethanol dehydrogenase, putative. (387 aa)
Gbem_1415Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
bamNThiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
Gbem_2125acyl-CoA synthetase, AMP-forming. (603 aa)
Gbem_2126enoyl-CoA hydratase and 3-hydroxyacyl-CoA dehydrogenase. (789 aa)
Gbem_2127Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
Gbem_2216Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein. (825 aa)
Gbem_2832Short-chain acyl-CoA dehydrogenase. (379 aa)
Gbem_2835Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
Gbem_3574Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
Gbem_3877Iron-containing alcohol dehydrogenase. (386 aa)
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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