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acuI acuI sucD-1 sucD-1 sucC-1 sucC-1 Gbem_0334 Gbem_0334 Gbem_0335 Gbem_0335 Gbem_0336 Gbem_0336 Gbem_0337 Gbem_0337 ackA-2 ackA-2 mceE mceE Gbem_0559 Gbem_0559 Gbem_0684 Gbem_0684 lpdA-1 lpdA-1 Gbem_0982 Gbem_0982 acnB acnB Gbem_1414 Gbem_1414 bamN bamN sucC-2 sucC-2 sucD-2 sucD-2 accB accB accC accC pta pta ackA-1 ackA-1 Gbem_2691 Gbem_2691 Gbem_2832 Gbem_2832 Gbem_2835 Gbem_2835 accA accA sucD-3 sucD-3 sucC-3 sucC-3 accD accD Gbem_3574 Gbem_3574 Gbem_4048 Gbem_4048
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
acuINADP-dependent menaquinol:acrylyl-CoA oxidoreductase. (334 aa)
sucD-1succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (298 aa)
sucC-1succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (386 aa)
Gbem_0334Oxaloacetate decarboxylase, carboxyltransferase subunit. (501 aa)
Gbem_0335Biotin-dependent propionyl-CoA carboxyltransferase. (514 aa)
Gbem_0336Hypothetical protein. (65 aa)
Gbem_0337Biotin/lipoyl attachment domain-containing protein. (131 aa)
ackA-2Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (409 aa)
mceEmethylmalonyl-CoA epimerase. (137 aa)
Gbem_0559(R)-methylmalonyl-CoA mutase, isobutyryl-CoA mutase-like catalytic subunit. (550 aa)
Gbem_0684(S)-methylmalonyl-CoA decarboxylase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
lpdA-1Dihydrolipoamide dehydrogenase. (470 aa)
Gbem_0982BioD and DRTGG domain protein. (364 aa)
acnBAconitate hydratase 2; Belongs to the aconitase/IPM isomerase family. (839 aa)
Gbem_1414acyl-CoA synthetase, ADP-forming. (697 aa)
bamNThiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
sucC-2succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (392 aa)
sucD-2succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (308 aa)
accBacetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (156 aa)
accCacetyl-CoA carboxylase, biotin carboxylase component; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (446 aa)
ptaPhosphate acetyltransferase. (333 aa)
ackA-1Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (421 aa)
Gbem_2691(R)-methylmalonyl-CoA mutase, adenosylcobamide-binding subunit. (134 aa)
Gbem_2832Short-chain acyl-CoA dehydrogenase. (379 aa)
Gbem_2835Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
accAacetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (319 aa)
sucD-3succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
sucC-3succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (389 aa)
accDacetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (282 aa)
Gbem_3574Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
Gbem_4048BioD and DRTGG domain protein. (370 aa)
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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