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ilvE ilvE Gbem_0627 Gbem_0627 leuB leuB asd-2 asd-2 asd-1 asd-1 argC argC Gbem_1264 Gbem_1264 cimA cimA acnB acnB argJ argJ gltA-1 gltA-1 acnA acnA Gbem_2258 Gbem_2258 argA argA leuD leuD leuC leuC leuA leuA ilvN ilvN ilvB ilvB ilvD ilvD ilvC ilvC icd icd argE argE Gbem_3287 Gbem_3287 argB argB argD argD gltA-2 gltA-2
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ilvEBranched-chain amino acid aminotransferase. (356 aa)
Gbem_0627Amino acid aminotransferase, putative. (434 aa)
leuB3-isopropylmalate/3-methylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (362 aa)
asd-2Aspartate-4-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (365 aa)
asd-1Aspartate-4-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (339 aa)
argCN-acetyl-glutamyl-5-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (346 aa)
Gbem_1264Aspartate 4-kinase; Belongs to the aspartokinase family. (404 aa)
cimACitramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (528 aa)
acnBAconitate hydratase 2; Belongs to the aconitase/IPM isomerase family. (839 aa)
argJOrnithine:glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. (391 aa)
gltA-1Citrate synthase; Belongs to the citrate synthase family. (441 aa)
acnAAconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (934 aa)
Gbem_2258Aconitate hydratase, putative. (648 aa)
argAN-acetylglutamate synthase; Belongs to the acetyltransferase family. (149 aa)
leuDIsopropylmalate/citramalate isomerase, small subunit; Belongs to the LeuD family. (175 aa)
leuCIsopropylmalate/citramalate isomerase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (427 aa)
leuA2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (515 aa)
ilvNAcetolactate synthase, small subunit. (163 aa)
ilvBAcetolactate synthase, large subunit, biosynthetic type. (566 aa)
ilvDDihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (553 aa)
ilvCKetol-acid reductoisomerase, class II; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (490 aa)
icdIsocitrate dehydrogenase, NADP-dependent; Belongs to the monomeric-type IDH family. (743 aa)
argEN-acetylornithine deacetylase, putative. (403 aa)
Gbem_3287Amino acid aminotransferase, putative. (397 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (292 aa)
argDAcetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (397 aa)
gltA-2Citrate synthase; Belongs to the citrate synthase family. (454 aa)
Your Current Organism:
Geobacter bemidjiensis
NCBI taxonomy Id: 404380
Other names: G. bemidjiensis Bem, Geobacter bemidjiensis Bem, Geobacter bemidjiensis str. Bem, Geobacter bemidjiensis strain Bem
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